RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 FBXW11Q9UKB1 542 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 MAFFQ9ULX9 164 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
SMARCA4-209ENST00000586122 A0A1B0GVL5 298 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 TISP43B9A030 160 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 M0QZQ0 153 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 ZMYND10O75800 440 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 PRPF6O94906 941 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 TKTP29401 623 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 BRCC3P46736 316 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 KCNA1Q09470 495 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 MRPL58Q14197 206 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 JADE1Q6IE81 842 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 SLC8B1Q6J4K2 584 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 HS2ST1Q7LGA3 356 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 PALB2Q86YC2 1186 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 CACTINQ8WUQ7 758 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 SCN1AP35498 2009 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
SMARCA4-209ENST00000586122 CCDC195A0A1B0GUA6 201 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 OAZ2O95190 189 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 KIF20AO95235 890 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 NFICP08651 508 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 RPL17P18621 184 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 TYMPP19971 482 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 OR1D2P34982 312 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 PNPLA4P41247 253 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 AFMP43652 599 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 YWHAHQ04917 246 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 SPAG1Q07617 926 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 CUL4BQ13620 913 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 CRELD2Q6UXH1 353 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 USP37Q86T82 979 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 RNF135Q8IUD6 432 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 C12orf56Q8IXR9 622 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 C12orf76Q8N812 135 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 FSIP1Q8NA03 581 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 ZNF461Q8TAF7 563 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 SMG7Q92540 1137 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 ACSF2Q96CM8 615 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 ZNF560Q96MR9 790 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 FGFBP2Q9BYJ0 223 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 EXOC1Q9NV70 894 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 RBAKQ9NYW8 714 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 DSEQ9UL01 958 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 DOCK8Q8NF50 2099 aa11.27□□□□□ -0.61
SMARCA4-209ENST00000586122 ANO9A1A5B4 782 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 GOLGA6L4A6NEF3 574 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 OR6C75A6NL08 312 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 I3L4J1 428 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 PIRO00625 290 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 TBC1D4O60343 1298 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 XYLBO75191 536 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 C8AP07357 584 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 ODC1P11926 461 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 TAF6P49848 677 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 NDUFA8P51970 172 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 LILRA4P59901 499 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 CTXN3Q4LDR2 81 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 PPM1LQ5SGD2 360 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 GLYCTKQ8IVS8 523 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 SAAL1Q96ER3 474 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 PIDD1Q9HB75 910 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 WDR6Q9NNW5 1121 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms