RNA–Protein interactions for RNA: ENST00000584592.5

CDK5RAP3-235, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 372 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-235ENST00000584592 TOPORSQ9NS56 1045 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RBAKQ9NYW8 714 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
CDK5RAP3-235ENST00000584592 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CEP250Q9BV73 2442 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 GOLGA8IPA6NC78 632 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 GOLGA8JA6NMD2 632 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 P4HA2O15460 535 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ITGA4P13612 1032 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 KCNJ6P48051 423 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 VAMP7P51809 220 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MIIPQ5JXC2 388 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PLEKHO2Q8TD55 490 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SLC35C1Q96A29 364 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SNTG2Q9NY99 539 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
CDK5RAP3-235ENST00000584592 GTPBP10A4D1E9 387 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 LACTBL1A8MY62 500 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 LOC730098B7Z3J9 87 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 STX10O60499 249 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 OFD1O75665 1012 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RECQL4O94761 1208 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 C4BPAP04003 597 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ATP1A3P13637 1013 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 KRT13P13646 458 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CYP3A5P20815 502 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 YARSP54577 528 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NR1I3Q14994 352 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 KRT31Q15323 416 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MAN2A1Q16706 1144 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 TCEAL5Q5H9L2 206 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NPAS4Q8IUM7 802 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 WDR49Q8IV35 697 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 KANSL3Q9P2N6 904 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 HES2Q9Y543 173 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 FASNP49327 2511 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 FAM208BQ5VWN6 2430 aa12.05□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MICAL3Q7RTP6 2002 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 A0A1B0GTH6 734 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ARL5CA6NH57 179 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 LRRIQ3A6PVS8 624 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 HOXA2O43364 376 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CXCL8P10145 99 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 AKAP5P24588 427 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 WNT7BP56706 349 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 DLG4P78352 724 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 GSE1Q14687 1217 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NAB2Q15742 525 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 DUOXA2Q1HG44 320 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ZACNQ401N2 412 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CXorf38Q8TB03 319 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CGRRF1Q99675 332 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CLDND1Q9NY35 253 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDK5RAP3-235ENST00000584592 CITO14578 2027 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 H3BNC9 293 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PTGESO14684 152 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 DGKIO75912 1065 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 AFPP02771 609 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 OSTNP61366 133 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 DEFB103AP81534 67 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 FANCCQ00597 558 aa12.03□□□□□ -0.48
CDK5RAP3-235ENST00000584592 PPP3CAQ08209 521 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms