RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 DISC1Q9NRI5 854 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 TMEM74BQ9NUR3 256 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 CEP72Q9P209 647 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 KANSL3Q9P2N6 904 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 STK39Q9UEW8 545 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 MBD1Q9UIS9 605 aaPredicted RBP4.62□□□□□ -1.67
CTC1-209ENST00000581729 SAMM50Q9Y512 469 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 RAI2Q9Y5P3 530 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 GTF3C3Q9Y5Q9 886 aa4.62□□□□□ -1.67
CTC1-209ENST00000581729 URB1O60287 2271 aaKnown RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 MYO9AB2RTY4 2548 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 CCDC194A0A1B0GVG4 234 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ARHGEF37A1IGU5 675 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 CARNS1A5YM72 827 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 WDR64B1ANS9 1081 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 SH2B2O14492 632 aaPredicted RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 ZNF263O14978 683 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 TADA2AO75478 443 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 DDAH1O94760 285 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 VNN2O95498 520 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 PRAMEF12O95522 483 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 EGFP01133 1207 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 EDN1P05305 212 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 HNRNPLP14866 589 aaKnown RBP eCLIP4.61□□□□□ -1.67
CTC1-209ENST00000581729 ZNF76P36508 570 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 BRCC3P46736 316 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 NT5C2P49902 561 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ADCY7P51828 1080 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ROR1Q01973 937 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 FCHO2Q0JRZ9 810 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 C19orf57Q0VDD7 668 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 PRR16Q569H4 304 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 DIEXFQ68CQ4 756 aaKnown RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 PMS2CLQ68D20 193 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 B3GNT9Q6UX72 402 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ARMCX6Q7L4S7 300 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 MFSD6LQ8IWD5 586 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 SMAP1Q8IYB5 467 aaPredicted RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 GPR65Q8IYL9 337 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 CTCFLQ8NI51 663 aaPredicted RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 SHKBP1Q8TBC3 707 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ZSCAN18Q8TBC5 510 aaPredicted RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 DDX27Q96GQ7 796 aaKnown RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 LRRC3Q9BY71 257 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 NIFKQ9BYG3 293 aaKnown RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 SMG9Q9H0W8 520 aaKnown RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 CRISPLD1Q9H336 500 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 FZD8Q9H461 694 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 GOLGA2P5Q9HBQ8 144 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 AVENQ9NQS1 362 aaPredicted RBP4.61□□□□□ -1.67
CTC1-209ENST00000581729 MTRRQ9UBK8 725 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 USP20Q9Y2K6 914 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 COL4A3BPQ9Y5P4 624 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 SF3B1O75533 1304 aaKnown RBP eCLIP4.61□□□□□ -1.67
CTC1-209ENST00000581729 FLNCQ14315 2725 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 ATG2BQ96BY7 2078 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 CSMD1Q96PZ7 3565 aa4.61□□□□□ -1.67
CTC1-209ENST00000581729 UTP20O75691 2785 aaKnown RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 PDCD11Q14690 1871 aaKnown RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 MYH9P35579 1960 aaKnown RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 GON4LQ3T8J9 2241 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 PTPRQQ9UMZ3 2332 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 A0A1W2PRU2 124 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 SMCO2A6NFE2 343 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 EIF4E1BA6NMX2 242 aaKnown RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 DDX11L8A8MPP1 907 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 EML1O00423 815 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 ZBTB39O15060 712 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CHADO15335 359 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 AKAP3O75969 853 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 NPTXRO95502 500 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CYP3A4P08684 503 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CALM1P0DP23 149 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CALM2P0DP24 149 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CALM3P0DP25 149 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 MS4A1P11836 297 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 MYL4P12829 197 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 KRT10P13645 584 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 PTPN2P17706 415 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 ENGP17813 658 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 ARF4P18085 180 aaPredicted RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 FGFR3P22607 806 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 ITPKBP27987 946 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 SMARCA1P28370 1054 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 PTGER3P43115 390 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 GSK3AP49840 483 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CDR1P51861 262 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 KPNA1P52294 538 aaPredicted RBP4.6□□□□□ -1.67
CTC1-209ENST00000581729 ARPP19P56211 112 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 MBTD1Q05BQ5 628 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 SRSF1Q07955 248 aaKnown RBP eCLIP4.6□□□□□ -1.67
CTC1-209ENST00000581729 LAMTOR4Q0VGL1 99 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 GRIK3Q13003 919 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 SEMA3BQ13214 749 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 TRIM61Q5EBN2 209 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 GLRA4Q5JXX5 417 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 DGKKQ5KSL6 1271 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 TRIM68Q6AZZ1 485 aa4.6□□□□□ -1.67
CTC1-209ENST00000581729 CCNI2Q6ZMN8 369 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms