RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 DPYSL4O14531 572 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 KHNYNO15037 678 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SLC37A4O43826 429 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 AKAP3O75969 853 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GLRA2P23416 452 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GBP1P32455 592 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 POU5F1BQ06416 359 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PPP2R5CQ13362 524 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 COL28A1Q2UY09 1125 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 RNF20Q5VTR2 975 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NCAPH2Q6IBW4 605 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SLC8B1Q6J4K2 584 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CD300LGQ6UXG3 332 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 MAEAQ7L5Y9 396 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 HAUS6Q7Z4H7 955 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TPH2Q8IWU9 490 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SHKBP1Q8TBC3 707 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LRRC3BQ96PB8 259 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SLC26A6Q9BXS9 759 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 VAV3Q9UKW4 847 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ZMYM2Q9UBW7 1377 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GCN1Q92616 2671 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 COL4A2P08572 1712 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SMG1Q96Q15 3661 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SPAARA0A1B0GVQ0 90 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 A0A1W2PRU2 124 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LRRIQ4A6NIV6 560 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PATE3B3GLJ2 98 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CDX4O14627 284 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 MARCH6O60337 910 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LIG1P18858 919 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ARL2P36404 184 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 FCHO2Q0JRZ9 810 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 EPHA7Q15375 998 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 STXBP5Q5T5C0 1151 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ARID3BQ8IVW6 561 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 C3orf58Q8NDZ4 430 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 MKNK1Q9BUB5 465 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GPR88Q9GZN0 384 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GPSM3Q9Y4H4 160 aa14.54□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LAMA5O15230 3695 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TMEM189-UBE2V1I3L0A0 370 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ATG13O75143 517 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ARHGAP29Q52LW3 1261 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TMEM209Q96SK2 561 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 POLR3FQ9H1D9 316 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PDZD7Q9H5P4 517 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ANKFY1Q9P2R3 1169 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LAMA1P25391 3075 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DMXL2Q8TDJ6 3036 aa14.53□□□□□ -0.08
CDK5RAP3-213ENST00000579605 A0A087WWV3 80 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 H7C4K7 107 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 N4BP3O15049 544 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 IRX4P78413 519 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SIM1P81133 766 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GRSF1Q12849 480 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 UPP1Q16831 310 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 INF2Q27J81 1249 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CTXN3Q4LDR2 81 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PROSER1Q86XN7 944 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CHCHD4Q8N4Q1 142 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CAMKK1Q8N5S9 505 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 LEMD2Q8NC56 503 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BBC3Q96PG8 261 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 NFKBIZQ9BYH8 718 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SLC32A1Q9H598 525 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PRMT7Q9NVM4 692 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FBXL5Q9UKA1 691 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PCDHA4Q9UN74 947 aa14.52□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RNF40O75150 1001 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CPA1P15085 419 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 MAPK8P45983 427 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EPHA5P54756 1037 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ITPRIPL2Q3MIP1 535 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TPGS2Q68CL5 300 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FSTL4Q6MZW2 842 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RNF19BQ6ZMZ0 732 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 HNRNPLLQ8WVV9 542 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FAM20AQ96MK3 541 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 UROC1Q96N76 676 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PPP1R10Q96QC0 940 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ADPGKQ9BRR6 497 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FLNBO75369 2602 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 MEFVO15553 781 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DGAT1O75907 488 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SLITRK3O94933 977 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EGFP01133 1207 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CPB1P15086 417 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DGKEP52429 567 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RCAN1P53805 252 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PRPF4BQ13523 1007 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 KARSQ15046 597 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BMP2KLQ5H9B9 411 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms