RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ELAC1Q9H777 363 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ABHD10Q9NUJ1 306 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 NUB1Q9Y5A7 615 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 PCDHB7Q9Y5E2 793 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 MICAL3Q7RTP6 2002 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 LRRC53A6NM62 1247 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 PPEF2O14830 753 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 MSNP26038 577 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 RBP5P82980 135 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 SGSM1Q2NKQ1 1148 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 BADQ92934 168 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 ZNF830Q96NB3 372 aaPredicted RBP25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 HTATIP2Q9BUP3 242 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 LRFN2Q9ULH4 789 aa25.86■■□□□ 1.73
ATPAF1-213ENST00000574428 NAB2Q15742 525 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 ARHGAP44Q17R89 818 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 C9orf57Q5W0N0 161 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 PDXDC1Q6P996 788 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 KREMEN1Q96MU8 473 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 SPAG5Q96R06 1193 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 ARID3AQ99856 593 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 SLC38A7Q9NVC3 462 aa25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 R3HCC1Q9Y3T6 440 aaKnown RBP25.85■■□□□ 1.73
ATPAF1-213ENST00000574428 EVI5O60447 810 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 PNMA6AP0CW24 399 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 SYN1P17600 705 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 CYP3A5P20815 502 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 RFX1P22670 979 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 LRRC8AQ8IWT6 810 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 RPUSD2Q8IZ73 545 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 HPDLQ96IR7 371 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 DNAJC7Q99615 494 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 CACNG4Q9UBN1 327 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 LTBP2Q14767 1821 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 INPPL1O15357 1258 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 JAM2P57087 298 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 DRAP1Q14919 205 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 E4F1Q66K89 784 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 CRIPAKQ8N1N5 446 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 OR8K1Q8NGG5 319 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 PANX2Q96RD6 677 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 STK33Q9BYT3 514 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 IL23AQ9NPF7 189 aa25.84■■□□□ 1.73
ATPAF1-213ENST00000574428 GATMP50440 423 aa25.83■■□□□ 1.73
ATPAF1-213ENST00000574428 GRIK3Q13003 919 aa25.83■■□□□ 1.73
ATPAF1-213ENST00000574428 GPR88Q9GZN0 384 aa25.83■■□□□ 1.73
ATPAF1-213ENST00000574428 KCNF1Q9H3M0 494 aa25.83■■□□□ 1.73
ATPAF1-213ENST00000574428 DAAM1Q9Y4D1 1078 aa25.83■■□□□ 1.73
ATPAF1-213ENST00000574428 ABHD14A-ACY1A0A1B0GW23 586 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 ANO9A1A5B4 782 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 F8VZ95 297 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 PFKMP08237 780 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 ATICP31939 592 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 MFAP3P55082 362 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 GCNT1Q02742 428 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 FPGSQ05932 587 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 NOMO2Q5JPE7 1267 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 NPAS4Q8IUM7 802 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 TAF4BQ92750 862 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 NXF1Q9UBU9 619 aaKnown RBP25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 ZMYND8Q9ULU4 1186 aaPredicted RBP25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 POLIQ9UNA4 740 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 TTC3P53804 2025 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 CUL2Q13617 745 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 WDR72Q3MJ13 1102 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 SCARA5Q6ZMJ2 495 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 URGCPQ8TCY9 931 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 NIF3L1Q9GZT8 377 aa25.82■■□□□ 1.72
ATPAF1-213ENST00000574428 CASTOR2A6NHX0 329 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 PIRO00625 290 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 UPP2O95045 317 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 LRPAP1P30533 357 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 PPIGQ13427 754 aaKnown RBP eCLIP25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 ZNF667Q5HYK9 610 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 C16orf59Q7L2K0 433 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 ABI1Q8IZP0 508 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 LRRC52Q8N7C0 313 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 RABGGTAQ92696 567 aa25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 TDRD15B5MCY1 1934 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-213ENST00000574428 CLCN1P35523 988 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 ARID5AQ03989 594 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 MYO1EQ12965 1108 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 TSR1Q2NL82 804 aaKnown RBP25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 SFMBT2Q5VUG0 894 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 OTOP2Q7RTS6 562 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 DPF3Q92784 378 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 VRTNQ9H8Y1 702 aa25.8■■□□□ 1.72
ATPAF1-213ENST00000574428 FOXN3O00409 490 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 ASPAP45381 313 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 CLCNKBP51801 687 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 WDR59Q6PJI9 974 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 ENOSF1Q7L5Y1 443 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 CASD1Q96PB1 797 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 PAAF1Q9BRP4 392 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 NUCKS1Q9H1E3 243 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 TBC1D13Q9NVG8 400 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 MYO6Q9UM54 1294 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 SCN1AP35498 2009 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 STAU1O95793 577 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms