RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 HCFC2Q9Y5Z7 792 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 BDP1A6H8Y1 2624 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
NUP88-205ENST00000572809 SLC16A4O15374 487 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 NCOR1O75376 2440 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 TADA2AO75478 443 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 SOD2P04179 222 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 EDN1P05305 212 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 THP07101 528 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 ALADP13716 330 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 KLRC2P26717 231 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 SMTNP53814 917 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 SLC12A3P55017 1021 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 RAD51AP2Q09MP3 1159 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 GRIK3Q13003 919 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 MAPK7Q13164 816 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 PTPN14Q15678 1187 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 DCAF4L1Q3SXM0 396 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 EEF1DP3Q658K8 133 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 SYCE2Q6PIF2 218 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 PHLPP2Q6ZVD8 1323 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 TAS1R1Q7RTX1 841 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 APBB1IPQ7Z5R6 666 aaPredicted RBP8.16□□□□□ -1.1
NUP88-205ENST00000572809 PPFIBP1Q86W92 1011 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 ACO2Q99798 780 aaKnown RBP8.16□□□□□ -1.1
NUP88-205ENST00000572809 SPOCK3Q9BQ16 436 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 APOL5Q9BWW9 433 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 PHF7Q9BWX1 381 aaPredicted RBP8.16□□□□□ -1.1
NUP88-205ENST00000572809 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 MRPL17Q9NRX2 175 aaKnown RBP8.16□□□□□ -1.1
NUP88-205ENST00000572809 MARCH5Q9NX47 278 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 TNFSF13BQ9Y275 285 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 GDAQ9Y2T3 454 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 CLIC4Q9Y696 253 aa8.16□□□□□ -1.1
NUP88-205ENST00000572809 ZMYM2Q9UBW7 1377 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 NPHP3-ACAD11A0A0J9YXS1 232 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 C2CD2LO14523 706 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 RECQL4O94761 1208 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 EFEMP2O95967 443 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 PLS3P13797 630 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 EPCAMP16422 314 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 WEE1P30291 646 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 RELBQ01201 579 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 SRSF11Q05519 484 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 GRIN1Q05586 938 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 ITIH3Q06033 890 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 STRN3Q13033 797 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 RESTQ13127 1097 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 TUSC3Q13454 348 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 DHX8Q14562 1220 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 CBX2Q14781 532 aaPredicted RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 OCLNQ16625 522 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 TMEM119Q4V9L6 283 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 ARSHQ5FYA8 562 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 KIAA0319Q5VV43 1072 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 KIAA1841Q6NSI8 718 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 CES5AQ6NT32 575 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 FAM173BQ6P4H8 233 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 RASSF8Q8NHQ8 419 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 SUSD6Q92537 303 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 RABGGTAQ92696 567 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 SNX21Q969T3 373 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 TCHPQ9BT92 498 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 TARS2Q9BW92 718 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 MRPL4Q9BYD3 311 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 ADAM7Q9H2U9 754 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 ZSCAN16Q9H4T2 348 aaPredicted RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 PTPRHQ9HD43 1115 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 CYLDQ9NQC7 956 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.15□□□□□ -1.1
NUP88-205ENST00000572809 CHST7Q9NS84 486 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 ZNF358Q9NW07 568 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 LARSQ9P2J5 1176 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 ARHGAP28Q9P2N2 729 aa8.15□□□□□ -1.1
NUP88-205ENST00000572809 SRPRBQ9Y5M8 271 aaKnown RBP8.15□□□□□ -1.1
NUP88-205ENST00000572809 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 LOC730098B7Z3J9 87 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 F8W810 466 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 PTGESO14684 152 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 DCXO43602 365 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 STX6O43752 255 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 ITGB2P05107 769 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 URODP06132 367 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 MARCKSP29966 332 aaPredicted RBP8.14□□□□□ -1.11
NUP88-205ENST00000572809 DDIT3P35638 169 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 GLUD2P49448 558 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 CLCN4P51793 760 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 YARSP54577 528 aaKnown RBP8.14□□□□□ -1.11
NUP88-205ENST00000572809 GDF10P55107 478 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 OSTNP61366 133 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 DSG1Q02413 1049 aa8.14□□□□□ -1.11
NUP88-205ENST00000572809 CEBPZQ03701 1054 aaKnown RBP8.14□□□□□ -1.11
NUP88-205ENST00000572809 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms