RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SLC38A8A6NNN8 435 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 I3L4J1 428 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 CDKL5O76039 1030 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 EPN2O95208 641 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 KCNK5O95279 499 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 SEC24AO95486 1093 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 MYL4P12829 197 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 ATP2B1P20020 1258 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 BRCC3P46736 316 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 EPHA5P54756 1037 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 ACAP1Q15027 740 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 PPP2R5AQ15172 486 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 GLRA4Q5JXX5 417 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 Q6ZS52 159 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 LSM14BQ9BX40 385 aaKnown RBP12.46□□□□□ -0.41
CHMP6-202ENST00000571457 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
CHMP6-202ENST00000571457 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
CHMP6-202ENST00000571457 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
CHMP6-202ENST00000571457 AFF4Q9UHB7 1163 aaKnown RBP12.46□□□□□ -0.41
CHMP6-202ENST00000571457 LAMA1P25391 3075 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 SPEGQ15772 3267 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 SMIM28A0A1B0GU29 152 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 SPECC1L-ADORA2AF8WAN1 911 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 NRG2O14511 850 aaPredicted RBP12.45□□□□□ -0.42
CHMP6-202ENST00000571457 RPP40O75818 363 aaKnown RBP12.45□□□□□ -0.42
CHMP6-202ENST00000571457 AKAP3O75969 853 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 LIG1P18858 919 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 NAMPTP43490 491 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 EFNA5P52803 228 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
CHMP6-202ENST00000571457 FCHO2Q0JRZ9 810 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 TWF1Q12792 350 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 CALCRLQ16602 461 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 C3orf58Q8NDZ4 430 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
CHMP6-202ENST00000571457 GOLGA2P5Q9HBQ8 144 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 CEP72Q9P209 647 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 FBXL5Q9UKA1 691 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
CHMP6-202ENST00000571457 TRIP11Q15643 1979 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 DPYSL4O14531 572 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 MOSPD3O75425 235 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CTHP32929 405 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 RPL9P32969 192 aaKnown RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 RAP1GAPP47736 663 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 SOX9P48436 509 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 PLD1Q13393 1074 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CCINQ13939 588 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 MRPL58Q14197 206 aaKnown RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 TEAD2Q15562 447 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 EEF1DP3Q658K8 133 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 RNF43Q68DV7 783 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 KDF1Q8NAX2 398 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 APPL2Q8NEU8 664 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 VPS45Q9NRW7 570 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 ZMIZ1Q9ULJ6 1067 aa12.44□□□□□ -0.42
CHMP6-202ENST00000571457 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
CHMP6-202ENST00000571457 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 TMEM8BA6NDV4 472 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 PODXLO00592 558 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 ATG13O75143 517 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 GJA1P17302 382 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 PTPAQ15257 358 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 CCDC6Q16204 474 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 ATF7IP2Q5U623 682 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 SHKBP1Q8TBC3 707 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 NACC1Q96RE7 527 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 BRMS1Q9HCU9 246 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 RXFP3Q9NSD7 469 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 CYP46A1Q9Y6A2 500 aa12.43□□□□□ -0.42
CHMP6-202ENST00000571457 FLNBO75369 2602 aaKnown RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 C1QTNF9BB2RNN3 333 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 NEMFO60524 1076 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms