RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZSCAN5DPP0CG00 497 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 SLC1A1P43005 524 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 CYP24A1Q07973 514 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 ATP13A4Q4VNC1 1196 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 C4orf33Q8N1A6 199 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 FBF1Q8TES7 1133 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 BSNDQ8WZ55 320 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 MAML1Q92585 1016 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 KMT5AQ9NQR1 393 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 TCEAL9Q9UHQ7 104 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 HERC5Q9UII4 1024 aaKnown RBP18.54■□□□□ 0.56
SCARF1-205ENST00000571272 PROSCO94903 275 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 CCNB1P14635 433 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 TARSP26639 723 aaKnown RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 CENPCQ03188 943 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 RNASELQ05823 741 aaKnown RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 DMP1Q13316 513 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 CCNG2Q16589 344 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 MAP4K3Q8IVH8 894 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 FAM213AQ9BRX8 229 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 FHDC1Q9C0D6 1143 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 KRT10P13645 584 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 ATP2A2P16615 1042 aaKnown RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 FASTKD3Q14CZ7 662 aaKnown RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 SPOPLQ6IQ16 392 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 GJD4Q96KN9 370 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 AVENQ9NQS1 362 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-205ENST00000571272 EURLQ9NYK6 297 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 PHTF1Q9UMS5 762 aa18.53■□□□□ 0.56
SCARF1-205ENST00000571272 UMODL1Q5DID0 1318 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 EIF4E1BA6NMX2 242 aaKnown RBP18.52■□□□□ 0.56
SCARF1-205ENST00000571272 ETS1P14921 441 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 PSEN1P49768 467 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 HSD17B4P51659 736 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.56
SCARF1-205ENST00000571272 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 FAXDC2Q96IV6 333 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 MFSD14AQ96MC6 490 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 C1orf112Q9NSG2 853 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 HAO1Q9UJM8 370 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 HNRNPDLO14979 420 aaKnown RBP18.52■□□□□ 0.56
SCARF1-205ENST00000571272 ASMTLO95671 621 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 KRT15P19012 456 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 DSG3P32926 999 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 ANKRD20A2Q5SQ80 823 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 ANKRD20A1Q5TYW2 823 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 ANKRD20A3Q5VUR7 823 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 RHOT1Q8IXI2 618 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 FAM81BQ96LP2 452 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 SYNPO2Q9UMS6 1093 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 CHKBQ9Y259 395 aa18.52■□□□□ 0.56
SCARF1-205ENST00000571272 GCAP28676 217 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.55
SCARF1-205ENST00000571272 SETDB1Q15047 1291 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 PKN2Q16513 984 aaKnown RBP18.52■□□□□ 0.55
SCARF1-205ENST00000571272 TRABD2AQ86V40 505 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 TEX2Q8IWB9 1127 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 TMC2Q8TDI7 906 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF516Q92618 1163 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 GRAMD1AQ96CP6 724 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 TRIM6Q9C030 488 aaPredicted RBP18.52■□□□□ 0.55
SCARF1-205ENST00000571272 KIAA1586Q9HCI6 787 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.55
SCARF1-205ENST00000571272 LOXHD1Q8IVV2 1947 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 MMP10P09238 476 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 KLRC2P26717 231 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 GCNT1Q02742 428 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ACVR2BQ13705 512 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF449Q6P9G9 518 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 FAM160B2Q86V87 743 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 C4orf19Q8IY42 314 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 BBOF1Q8ND07 529 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 BICD1Q96G01 975 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 TRABDQ9H4I3 376 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 SLC24A3Q9HC58 644 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 NKX1-2Q9UD57 310 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-205ENST00000571272 GRID1Q9ULK0 1009 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ACTL7BQ9Y614 415 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF536O15090 1300 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 LYPLA2O95372 231 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 CCNE2O96020 404 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 POLGP54098 1239 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-205ENST00000571272 PSMC5P62195 406 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ANO5Q75V66 913 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 MON1BQ7L1V2 547 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 LRRC37BQ96QE4 947 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 TXLNGQ9NUQ3 528 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 DNPEPQ9ULA0 475 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF148Q9UQR1 794 aa18.51■□□□□ 0.55
SCARF1-205ENST00000571272 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 TCF4P15884 667 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 ATF7P17544 494 aaPredicted RBP18.5■□□□□ 0.55
SCARF1-205ENST00000571272 RPA3P35244 121 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms