RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	PLXNA4	Q9HCM2	1894 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	GOLGA6L22	H0YM25	854 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	EXOC3	O60645	756 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	TNNC2	P02585	160 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	TMEM191B	P0C7N4	346 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	ODC1	P11926	461 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SOX4	Q06945	474 aa	Predicted RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	MYO1E	Q12965	1108 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	STK4	Q13043	487 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SNW1	Q13573	536 aa	Known RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SNRNP35	Q16560	246 aa	Known RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	DUOXA2	Q1HG44	320 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SV2C	Q496J9	727 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	ATAT1	Q5SQI0	421 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	ZNF280D	Q6N043	979 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	CRELD2	Q6UXH1	353 aa	Predicted RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	LRRC52	Q8N7C0	313 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	HASPIN	Q8TF76	798 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SLC22A17	Q8WUG5	538 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	SMARCE1	Q969G3	411 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	C18orf25	Q96B23	403 aa	Predicted RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	IPO9	Q96P70	1041 aa	Known RBP	19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	ADAM7	Q9H2U9	754 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	FRMD4B	Q9Y2L6	1034 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150	PCDHGC5	Q9Y5F6	944 aa		19.46	■□□□□ 0.71
PKD1-238	ENST00000570150		M0QZQ0	153 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	MAPK13	O15264	365 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	TYMP	P19971	482 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	GTF2F1	P35269	517 aa	Known RBP eCLIP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	AARS	P49588	968 aa	Known RBP eCLIP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	TAF6	P49848	677 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	ENPEP	Q07075	957 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	NFIL3	Q16649	462 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	UVSSA	Q2YD98	709 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	COBLL1	Q53SF7	1204 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	RTP2	Q5QGT7	225 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	ZBTB41	Q5SVQ8	909 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	LIN9	Q5TKA1	542 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	LLGL2	Q6P1M3	1020 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	DSTYK	Q6XUX3	929 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	CCDC149	Q6ZUS6	474 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	METTL23	Q86XA0	190 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	WDR49	Q8IV35	697 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	NELFCD	Q8IXH7	590 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	LNX1	Q8TBB1	728 aa	Predicted RBP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	SPATA18	Q8TC71	538 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	NOC3L	Q8WTT2	800 aa	Known RBP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	AUTS2	Q8WXX7	1259 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	SAAL1	Q96ER3	474 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	CHAMP1	Q96JM3	812 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	GOLGA2P5	Q9HBQ8	144 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	MTRR	Q9UBK8	725 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	TUBGCP4	Q9UGJ1	667 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	BARX2	Q9UMQ3	279 aa	Predicted RBP	19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	TRAF3IP3	Q9Y228	551 aa		19.45	■□□□□ 0.7
PKD1-238	ENST00000570150	ANO9	A1A5B4	782 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	TISP43	B9A030	160 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	PIR	O00625	290 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	TGFB1I1	O43294	461 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	MBTPS2	O43462	519 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	GLP2R	O95838	553 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	LILRA4	P59901	499 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	RBP5	P82980	135 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	TFAM	Q00059	246 aa	Known RBP	19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	YWHAH	Q04917	246 aa	Predicted RBP	19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	RAB33A	Q14088	237 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	C9orf57	Q5W0N0	161 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	TPGS2	Q68CL5	300 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	CLEC17A	Q6ZS10	378 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	TAS1R1	Q7RTX1	841 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	HPS3	Q969F9	1004 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	FGFBP2	Q9BYJ0	223 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	PCIF1	Q9H4Z3	704 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	NR2E1	Q9Y466	385 aa		19.44	■□□□□ 0.7
PKD1-238	ENST00000570150	OR6C75	A6NL08	312 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	LINC01565	O15544	149 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	OAZ2	O95190	189 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	NFIC	P08651	508 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	HNRNPA1	P09651	372 aa	Known RBP eCLIP	19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	CASP1	P29466	404 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	HOXA9	P31269	272 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	HOXD13	P35453	343 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	SMARCB1	Q12824	385 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	PSMD6	Q15008	389 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	EDRF1	Q3B7T1	1238 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	ZNF658	Q5TYW1	1059 aa	Predicted RBP	19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	SLC8B1	Q6J4K2	584 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	ADHFE1	Q8IWW8	467 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	KIAA0895	Q8NCT3	520 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	RABGGTA	Q92696	567 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	NECAB3	Q96P71	396 aa	Predicted RBP	19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	TSG101	Q99816	390 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150	CXCL16	Q9H2A7	254 aa		19.43	■□□□□ 0.7
PKD1-238	ENST00000570150		F8W810	466 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	MEFV	O15553	781 aa	Predicted RBP	19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	POU2F2	P09086	479 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	ELF1	P32519	619 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	CYP2J2	P51589	502 aa		19.42	■□□□□ 0.7
PKD1-238	ENST00000570150	CBX2	Q14781	532 aa	Predicted RBP	19.42	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms