RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 TSC2P49815 1807 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 WDFY3Q8IZQ1 3526 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 ABLIM1O14639 778 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 SYN3O14994 580 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 EPB41L2O43491 1005 aaKnown RBP11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 NEMFO60524 1076 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 VNN2O95498 520 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 GJA1P17302 382 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 CCNE1P24864 410 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 TXKP42681 527 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 CXCL12P48061 93 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 SHC2P98077 582 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 SIM2Q14190 667 aaPredicted RBP11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 PPP2R5DQ14738 602 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 TMC8Q8IU68 726 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 CCDC43Q96MW1 224 aaKnown RBP11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 MKNK1Q9BUB5 465 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 CYP4F11Q9HBI6 524 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 RXFP3Q9NSD7 469 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
LPCAT4-208ENST00000569804 PODXLO00592 558 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 PRRG1O14668 218 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 ZNF197O14709 1029 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 PFKFB2O60825 505 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 CDKL5O76039 1030 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 REC8O95072 547 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 CYP11B2P19099 503 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 HOXA6P31267 233 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 KRT2P35908 639 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 GRM5P41594 1212 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 SOX9P48436 509 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 LIMK1P53667 647 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 FCHO2Q0JRZ9 810 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 ATF7IP2Q5U623 682 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 TAS1R3Q7RTX0 852 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 LONP2Q86WA8 852 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 MFSD6LQ8IWD5 586 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 SHKBP1Q8TBC3 707 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 ZSCAN18Q8TBC5 510 aaPredicted RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 DNAJC25Q9H1X3 360 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 CDT1Q9H211 546 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 PTPRHQ9HD43 1115 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 RALYQ9UKM9 306 aaKnown RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 TNFSF13BQ9Y275 285 aa11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 FASNP49327 2511 aaKnown RBP11.75□□□□□ -0.53
LPCAT4-208ENST00000569804 ATG2BQ96BY7 2078 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 PKD1L2Q7Z442 2459 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 HEPACAM2A8MVW5 462 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 XBP1P17861 261 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 CNR2P34972 360 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 TWF1Q12792 350 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 CCINQ13939 588 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 TEAD2Q15562 447 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 N4BP2L1Q5TBK1 243 aaPredicted RBP11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 TPGS2Q68CL5 300 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 TMEM130Q8N3G9 435 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 DEPTORQ8TB45 409 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 MSANTD3Q96H12 275 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 SUSD3Q96L08 255 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 LRRC3BQ96PB8 259 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 CRISPLD1Q9H336 500 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 AFF4Q9UHB7 1163 aaKnown RBP11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 KIAA1549LQ6ZVL6 1849 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 DENND4CQ5VZ89 1909 aa11.74□□□□□ -0.53
LPCAT4-208ENST00000569804 MYBPHLA2RUH7 354 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 BTBD18B2RXH4 712 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 ZNF263O14978 683 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 CHADO15335 359 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 OBSL1O75147 1896 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 KCNE1P15382 129 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 ANK1P16157 1881 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 LIG1P18858 919 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 PROZP22891 400 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 RPA1P27694 616 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 ELF1P32519 619 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 CTHP32929 405 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 ARPP19P56211 112 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 ECM1Q16610 540 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 STXBP5Q5T5C0 1151 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 RNF19BQ6ZMZ0 732 aa11.73□□□□□ -0.53
LPCAT4-208ENST00000569804 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms