RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CTNNB1P35222 781 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 PPM1AP35813 382 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 BMPR1AP36894 532 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 MYL7Q01449 175 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 TRPC3Q13507 836 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 NCOA4Q13772 614 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 CBWD6Q4V339 395 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 CBWD3Q5JTY5 395 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 CBWD5Q5RIA9 395 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 PPP2R2DQ66LE6 453 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 SCARA3Q6AZY7 606 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
SPG7-218ENST00000568205 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 TIFAQ96CG3 184 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 SAMD11Q96NU1 681 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
SPG7-218ENST00000568205 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 SLC28A3Q9HAS3 691 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 MARCH5Q9NX47 278 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 SPG21Q9NZD8 308 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
SPG7-218ENST00000568205 FNDC1Q4ZHG4 1894 aaPredicted RBP16.94■□□□□ 0.3
SPG7-218ENST00000568205 TMEM189-UBE2V1I3L0A0 370 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 PMM2O15305 246 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 P4HA2O15460 535 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 B3GAT3O94766 335 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 TPM2P07951 284 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 IGFBP6P24592 240 aaPredicted RBP16.93■□□□□ 0.3
SPG7-218ENST00000568205 PNPLA4P41247 253 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
SPG7-218ENST00000568205 ERVK-21P61565 698 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 MIIPQ5JXC2 388 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 CD300LGQ6UXG3 332 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 APTXQ7Z2E3 356 aaKnown RBP16.93■□□□□ 0.3
SPG7-218ENST00000568205 LRRC52Q8N7C0 313 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
SPG7-218ENST00000568205 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 ZNF560Q96MR9 790 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 PLVAPQ9BX97 442 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 RBSNQ9H1K0 784 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 NDST4Q9H3R1 872 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 ANK1P16157 1881 aa16.93■□□□□ 0.3
SPG7-218ENST00000568205 LRRC10BA6NIK2 292 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 CST3P01034 146 aaPredicted RBP16.92■□□□□ 0.3
SPG7-218ENST00000568205 ITGB1P05556 798 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 TAF6P49848 677 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 MYL6P60660 151 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 EPC2Q52LR7 807 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 FBXL13Q8NEE6 735 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 TMEM169Q96HH4 297 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 HPDLQ96IR7 371 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 XYLT2Q9H1B5 865 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 VPS16Q9H269 839 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 MTUS1Q9ULD2 1270 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 COQ4Q9Y3A0 265 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
SPG7-218ENST00000568205 C5orf67F2Z3F1 127 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 PES1O00541 588 aaKnown RBP16.91■□□□□ 0.3
SPG7-218ENST00000568205 SPTLC1O15269 473 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 TADA2AO75478 443 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 FGF18O76093 207 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 RB1P06400 928 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 PAX3P23760 479 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 ATICP31939 592 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPG7-218ENST00000568205 LILRA4P59901 499 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 CETN1Q12798 172 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 SV2CQ496J9 727 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 KLHL23Q8NBE8 558 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 SEMA4DQ92854 862 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 RAB20Q9NX57 234 aa16.91■□□□□ 0.3
SPG7-218ENST00000568205 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 STAU1O95793 577 aaKnown RBP16.9■□□□□ 0.3
SPG7-218ENST00000568205 ASS1P00966 412 aaKnown RBP16.9■□□□□ 0.3
SPG7-218ENST00000568205 BRCC3P46736 316 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 FANCCQ00597 558 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 PLCB3Q01970 1234 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 FUT10Q6P4F1 479 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 FBXO22Q8NEZ5 403 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 TAF4BQ92750 862 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
SPG7-218ENST00000568205 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
SPG7-218ENST00000568205 SF3B1O75533 1304 aaKnown RBP eCLIP16.9■□□□□ 0.36e-13■■■■■ 155.1
SPG7-218ENST00000568205 PDCD11Q14690 1871 aaKnown RBP16.89■□□□□ 0.29
SPG7-218ENST00000568205 GTPBP10A4D1E9 387 aaKnown RBP16.89■□□□□ 0.29
SPG7-218ENST00000568205 KPNA7A9QM74 516 aa16.89■□□□□ 0.29
SPG7-218ENST00000568205 I3L4J1 428 aa16.89■□□□□ 0.29
SPG7-218ENST00000568205 SOX1O00570 391 aaPredicted RBP16.89■□□□□ 0.29
SPG7-218ENST00000568205 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms