RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 A0A087X0B3 334 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 MYMKA6NI61 221 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 CCL16O15467 120 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 TRAPPC3O43617 180 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 GCNT3O95395 438 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 F13A1P00488 732 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 C8AP07357 584 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 CLTAP09496 248 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 DDIT3P35638 169 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 MCL1Q07820 350 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 MTMR3Q13615 1198 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 UPP1Q16831 310 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 SLC10A6Q3KNW5 377 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 ADALQ6DHV7 355 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 OTOP3Q7RTS5 596 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 LNX1Q8TBB1 728 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 DHX58Q96C10 678 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 POM121Q96HA1 1249 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 CLSTN3Q9BQT9 956 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 NTPCRQ9BSD7 190 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 CNTN3Q9P232 1028 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 FNIP2Q9P278 1114 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 FBXW11Q9UKB1 542 aa11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF638Q14966 1978 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-206ENST00000566779 ANKRD63C9JTQ0 380 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 TMEM189-UBE2V1I3L0A0 370 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 PRRG1O14668 218 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 OGTO15294 1046 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 BRD1O95696 1058 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 EFEMP2O95967 443 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
GTF3C1-206ENST00000566779 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
GTF3C1-206ENST00000566779 KCNE1P15382 129 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 FGFR3P22607 806 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 ME1P48163 572 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 NASPP49321 788 aaPredicted RBP11□□□□□ -0.65
GTF3C1-206ENST00000566779 ACOT2P49753 483 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF131P52739 623 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 NTHL1P78549 312 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 PKP1Q13835 747 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
GTF3C1-206ENST00000566779 PDXDC1Q6P996 788 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 PACS2Q86VP3 889 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 SYCP3Q8IZU3 236 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 POMGNT1Q8WZA1 660 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 PLEKHA4Q9H4M7 779 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 MTRRQ9UBK8 725 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 NOTCH4Q99466 2003 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 MUC6Q6W4X9 2439 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 MUC3AQ02505 3323 aa11□□□□□ -0.65
GTF3C1-206ENST00000566779 MIA3Q5JRA6 1907 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 LACTBL1A8MY62 500 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 SPTLC1O15269 473 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 NFICP08651 508 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 CPB1P15086 417 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 GAP43P17677 238 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 RFX1P22670 979 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 CDR1P51861 262 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ASIC1P78348 528 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 SIGLEC14Q08ET2 396 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 TUSC1Q2TAM9 212 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 CTXN3Q4LDR2 81 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 JADE1Q6IE81 842 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 SLC39A4Q6P5W5 647 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 CD300LGQ6UXG3 332 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 DSTYKQ6XUX3 929 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ANKS3Q6ZW76 656 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 GRASPQ7Z6J2 395 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ING5Q8WYH8 240 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF707Q96C28 371 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 FAM122AQ96E09 287 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 SAAL1Q96ER3 474 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 PRKD2Q9BZL6 878 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 MFSD1Q9H3U5 465 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 FBXL21Q9UKT6 434 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 UBQLN1Q9UMX0 589 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 SORCS3Q9UPU3 1222 aa10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 TIMM13Q9Y5L4 95 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-206ENST00000566779 GOLGA8IPA6NC78 632 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 GOLGA8JA6NMD2 632 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 PPEF2O14830 753 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 SNPHO15079 494 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 XPOTO43592 962 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 XYLBO75191 536 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 PDGFBP01127 241 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms