RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 ARPP19P56211 112 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 CUL4BQ13620 913 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 RAB33AQ14088 237 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 FAM26FQ5R3K3 315 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 SPATA1Q5VX52 437 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 CRELD2Q6UXH1 353 aaPredicted RBP20.96■□□□□ 0.95
CCDC113-204ENST00000566498 UNC13DQ70J99 1090 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 GRAMD1CQ8IYS0 662 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 GLIS3Q8NEA6 775 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 APPL2Q8NEU8 664 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 CMASQ8NFW8 434 aaPredicted RBP20.96■□□□□ 0.95
CCDC113-204ENST00000566498 SMG7Q92540 1137 aaKnown RBP20.96■□□□□ 0.95
CCDC113-204ENST00000566498 SAAL1Q96ER3 474 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 SUSD3Q96L08 255 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 DERAQ9Y315 318 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 BACE2Q9Y5Z0 518 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 VWA8A3KMH1 1905 aa20.96■□□□□ 0.95
CCDC113-204ENST00000566498 MTCL1Q9Y4B5 1905 aaKnown RBP20.96■□□□□ 0.95
CCDC113-204ENST00000566498 GOLGA8IPA6NC78 632 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 GOLGA8JA6NMD2 632 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 NFICP08651 508 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 NUCB2P80303 420 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 POU5F1Q01860 360 aaKnown RBP20.95■□□□□ 0.94
CCDC113-204ENST00000566498 LIN9Q5TKA1 542 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 ARMCX5Q6P1M9 558 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 RSPO2Q6UXX9 243 aaPredicted RBP20.95■□□□□ 0.94
CCDC113-204ENST00000566498 CYP26C1Q6V0L0 522 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 DSTYKQ6XUX3 929 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 PAGE5Q96GU1 130 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 USP25Q9UHP3 1055 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 TCHHQ07283 1943 aa20.95■□□□□ 0.94
CCDC113-204ENST00000566498 PVALEFA0A1B0GWK0 134 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 ZMYND10O75800 440 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 IL18RAPO95256 599 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 SYKP43405 635 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 CTXN3Q4LDR2 81 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 TMEM31Q5JXX7 168 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 PPM1LQ5SGD2 360 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 CCDC149Q6ZUS6 474 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 ZSWIM2Q8NEG5 633 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 ZNF507Q8TCN5 953 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 ACSF2Q96CM8 615 aaPredicted RBP20.94■□□□□ 0.94
CCDC113-204ENST00000566498 CBWD1Q9BRT8 395 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 PRKD2Q9BZL6 878 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 GDPD2Q9HCC8 539 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 ZDHHC7Q9NXF8 308 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 DPP3Q9NY33 737 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 PCDHB8Q9UN66 801 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 C2CD2Q9Y426 696 aa20.94■□□□□ 0.94
CCDC113-204ENST00000566498 FAM86C2PA6NEL3 165 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 C2CD4DB7Z1M9 353 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 ACTN4O43707 911 aaKnown RBP20.93■□□□□ 0.94
CCDC113-204ENST00000566498 EXTL3O43909 919 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 ELF1P32519 619 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 C9orf57Q5W0N0 161 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 USP37Q86T82 979 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 PLCD3Q8N3E9 789 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 TDRD5Q8NAT2 981 aaKnown RBP20.93■□□□□ 0.94
CCDC113-204ENST00000566498 SLC39A2Q9NP94 309 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 LIMD1Q9UGP4 676 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 FBXW11Q9UKB1 542 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 POLIQ9UNA4 740 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 USTQ9Y2C2 406 aa20.93■□□□□ 0.94
CCDC113-204ENST00000566498 TIMM13Q9Y5L4 95 aaPredicted RBP20.93■□□□□ 0.94
CCDC113-204ENST00000566498 EIF3DO15371 548 aaKnown RBP eCLIP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 C8AP07357 584 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 NDUFA8P51970 172 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 LILRA4P59901 499 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 TFAMQ00059 246 aaKnown RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 MRPL58Q14197 206 aaKnown RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 UVSSAQ2YD98 709 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 OTOP3Q7RTS5 596 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 NELFCDQ8IXH7 590 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 GPD1LQ8N335 351 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 FSIP1Q8NA03 581 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 ZNF461Q8TAF7 563 aa20.92■□□□□ 0.94
CCDC113-204ENST00000566498 CACTINQ8WUQ7 758 aaKnown RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 ZNF707Q96C28 371 aaPredicted RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 WDR6Q9NNW5 1121 aaKnown RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 RBAKQ9NYW8 714 aaPredicted RBP20.92■□□□□ 0.94
CCDC113-204ENST00000566498 M0QZQ0 153 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 PIRO00625 290 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 PPEF2O14830 753 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 KIAA0391O15091 583 aaKnown RBP20.91■□□□□ 0.94
CCDC113-204ENST00000566498 GPR37L1O60883 481 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 HOXD13P35453 343 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 YWHAHQ04917 246 aaPredicted RBP20.91■□□□□ 0.94
CCDC113-204ENST00000566498 SLC8B1Q6J4K2 584 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 ZNF280DQ6N043 979 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 EPM2AIP1Q7L775 607 aaPredicted RBP20.91■□□□□ 0.94
CCDC113-204ENST00000566498 SLC7A14Q8TBB6 771 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 RHOBTB2Q9BYZ6 727 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 FBXL5Q9UKA1 691 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
CCDC113-204ENST00000566498 C2orf16Q68DN1 1984 aa20.9■□□□□ 0.94
CCDC113-204ENST00000566498 ANO9A1A5B4 782 aa20.9■□□□□ 0.94
CCDC113-204ENST00000566498 GOLGA6L4A6NEF3 574 aa20.9■□□□□ 0.94
CCDC113-204ENST00000566498 ZNF233A6NK53 670 aa20.9■□□□□ 0.94
CCDC113-204ENST00000566498 PRRG1O14668 218 aa20.9■□□□□ 0.94
CCDC113-204ENST00000566498 CCL16O15467 120 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms