RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 COL4A2P08572 1712 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 HNRNPDLO14979 420 aaKnown RBP16.02■□□□□ 0.16
USB1-210ENST00000565151 SPTLC1O15269 473 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 FSHRP23945 695 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 ADSSP30520 456 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 HOXA9P31269 272 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.16
USB1-210ENST00000565151 NASPP49321 788 aaPredicted RBP16.02■□□□□ 0.16
USB1-210ENST00000565151 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
USB1-210ENST00000565151 PDXDC1Q6P996 788 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 PARM1Q6UWI2 310 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 FGF14Q92915 247 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 SNX21Q969T3 373 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 BICD1Q96G01 975 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 IGSF9Q9P2J2 1179 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 TFIP11Q9UBB9 837 aaKnown RBP16.02■□□□□ 0.16
USB1-210ENST00000565151 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
USB1-210ENST00000565151 STYXL1Q9Y6J8 313 aa16.02■□□□□ 0.16
USB1-210ENST00000565151 CFAP54Q96N23 3096 aa16.02■□□□□ 0.15
USB1-210ENST00000565151 OBSL1O75147 1896 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 ARHGEF37A1IGU5 675 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 H0YCG3 227 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 M0QZQ0 153 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 SYN3O14994 580 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 KRT18P05783 430 aaKnown RBP16.01■□□□□ 0.15
USB1-210ENST00000565151 CFHP08603 1231 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 NFICP08651 508 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 POU2F2P09086 479 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 ACOT2P49753 483 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 LIN9Q5TKA1 542 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 JADE1Q6IE81 842 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 ELMSAN1Q6PJG2 1045 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 LINC00301Q8NCQ3 95 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 RASSF8Q8NHQ8 419 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 ZNF461Q8TAF7 563 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 STAMQ92783 540 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 FGF13Q92913 245 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 FAM84AQ96KN4 292 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 FAM86C1Q9NVL1 165 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
USB1-210ENST00000565151 TBC1D7Q9P0N9 293 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 STK17AQ9UEE5 414 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 NUMBLQ9Y6R0 609 aa16.01■□□□□ 0.15
USB1-210ENST00000565151 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
USB1-210ENST00000565151 TICRRQ7Z2Z1 1910 aa16■□□□□ 0.15
USB1-210ENST00000565151 KIF26AQ9ULI4 1882 aaPredicted RBP16■□□□□ 0.15
USB1-210ENST00000565151 MCM4P33991 863 aa16■□□□□ 0.15
USB1-210ENST00000565151 ARPP19P56211 112 aa16■□□□□ 0.15
USB1-210ENST00000565151 PKP1Q13835 747 aa16■□□□□ 0.15
USB1-210ENST00000565151 UVSSAQ2YD98 709 aa16■□□□□ 0.15
USB1-210ENST00000565151 SPATA1Q5VX52 437 aa16■□□□□ 0.15
USB1-210ENST00000565151 RRAGBQ5VZM2 374 aa16■□□□□ 0.15
USB1-210ENST00000565151 RNF19BQ6ZMZ0 732 aa16■□□□□ 0.15
USB1-210ENST00000565151 NPAS3Q8IXF0 933 aa16■□□□□ 0.15
USB1-210ENST00000565151 GLIS3Q8NEA6 775 aa16■□□□□ 0.15
USB1-210ENST00000565151 MSTO1Q9BUK6 570 aa16■□□□□ 0.15
USB1-210ENST00000565151 CDH7Q9ULB5 785 aa16■□□□□ 0.15
USB1-210ENST00000565151 POLIQ9UNA4 740 aa16■□□□□ 0.15
USB1-210ENST00000565151 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
USB1-210ENST00000565151 FANCMQ8IYD8 2048 aa16■□□□□ 0.15
USB1-210ENST00000565151 PATJQ8NI35 1801 aa16■□□□□ 0.15
USB1-210ENST00000565151 FRMD3A2A2Y4 597 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 TBCAO75347 108 aaKnown RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 MOSPD3O75425 235 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 OAZ2O95190 189 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 OR4Q2P0C623 313 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 ATF2P15336 505 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 CCR2P41597 374 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 MRE11P49959 708 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 PPP2R3AQ06190 1150 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 E2F4Q16254 413 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 CTXN3Q4LDR2 81 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 FOXD4L5Q5VV16 416 aaPredicted RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 ASTLQ6HA08 431 aaPredicted RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 TCEAL8Q8IYN2 117 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 SIX5Q8N196 739 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 FOXD4L4Q8WXT5 416 aaPredicted RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 ING5Q8WYH8 240 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 TCEAL4Q96EI5 215 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 TMEM209Q96SK2 561 aa15.99■□□□□ 0.15
USB1-210ENST00000565151 ZSCAN16Q9H4T2 348 aaPredicted RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 RPF1Q9H9Y2 349 aaKnown RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 UBQLN1Q9UMX0 589 aaKnown RBP15.99■□□□□ 0.15
USB1-210ENST00000565151 ANO9A1A5B4 782 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 PIRO00625 290 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 RHOP08100 348 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 SRFP11831 508 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 CYP3A5P20815 502 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 CLCN5P51795 746 aa15.98■□□□□ 0.15
USB1-210ENST00000565151 LILRA4P59901 499 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms