RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 ASCL5Q7RTU5 278 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 GPBP1Q86WP2 473 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 SHDQ96IW2 340 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 AFF4Q9UHB7 1163 aaKnown RBP18.23■□□□□ 0.51
CCNF-203ENST00000564236 UBQLN1Q9UMX0 589 aaKnown RBP18.23■□□□□ 0.51
CCNF-203ENST00000564236 MORC2Q9Y6X9 1032 aaPredicted RBP18.23■□□□□ 0.51
CCNF-203ENST00000564236 NOTCH4Q99466 2003 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 OGTO15294 1046 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 LRG1P02750 347 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 PTPN2P17706 415 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 PLCG1P19174 1290 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 PAX3P23760 479 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 ELF1P32519 619 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 MCM4P33991 863 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 LIG4P49917 911 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 EPHA5P54756 1037 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 PFKPQ01813 784 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
CCNF-203ENST00000564236 PRKCQQ04759 706 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 SF3A1Q15459 793 aaKnown RBP18.22■□□□□ 0.51
CCNF-203ENST00000564236 ENOX2Q16206 610 aaKnown RBP18.22■□□□□ 0.51
CCNF-203ENST00000564236 CTXN3Q4LDR2 81 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 POTEHQ6S545 545 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 MAP4K3Q8IVH8 894 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 CD302Q8IX05 232 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 PJA1Q8NG27 643 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 OSBPL6Q9BZF3 934 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 MRPS23Q9Y3D9 190 aaKnown RBP18.22■□□□□ 0.51
CCNF-203ENST00000564236 SIT1Q9Y3P8 196 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 INSL5Q9Y5Q6 135 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 VPS13AQ96RL7 3174 aa18.22■□□□□ 0.51
CCNF-203ENST00000564236 TRIP11Q15643 1979 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 PRRG1O14668 218 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 HNRNPDLO14979 420 aaKnown RBP18.21■□□□□ 0.51
CCNF-203ENST00000564236 TRAK2O60296 914 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 SEC24AO95486 1093 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 DDIT3P35638 169 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 TNFSF9P41273 254 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 MCM6Q14566 821 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 KARSQ15046 597 aaKnown RBP18.21■□□□□ 0.51
CCNF-203ENST00000564236 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 MYCT1Q8N699 235 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
CCNF-203ENST00000564236 BICD1Q96G01 975 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 CYP4F11Q9HBI6 524 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 CPSF3Q9UKF6 684 aaKnown RBP18.21■□□□□ 0.51
CCNF-203ENST00000564236 STYXL1Q9Y6J8 313 aa18.21■□□□□ 0.51
CCNF-203ENST00000564236 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 LACTBL1A8MY62 500 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 K7ENM7 598 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 ZNF197O14709 1029 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
CCNF-203ENST00000564236 FAM13AO94988 1023 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 TYMPP19971 482 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 PDCP20941 246 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 YWHAHQ04917 246 aaPredicted RBP18.2■□□□□ 0.5
CCNF-203ENST00000564236 PTPAQ15257 358 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 SPATA1Q5VX52 437 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 LEMD2Q8NC56 503 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 NKD2Q969F2 451 aaPredicted RBP18.2■□□□□ 0.5
CCNF-203ENST00000564236 ELSPBP1Q96BH3 223 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 SEMA4AQ9H3S1 761 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 DERAQ9Y315 318 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 PDCD11Q14690 1871 aaKnown RBP18.2■□□□□ 0.5
CCNF-203ENST00000564236 CITO14578 2027 aa18.2■□□□□ 0.5
CCNF-203ENST00000564236 KANSL1LA0AUZ9 987 aa18.19■□□□□ 0.5
CCNF-203ENST00000564236 FCARP24071 287 aa18.19■□□□□ 0.5
CCNF-203ENST00000564236 MLF2Q15773 248 aaPredicted RBP18.19■□□□□ 0.5
CCNF-203ENST00000564236 SLC44A4Q53GD3 710 aa18.19■□□□□ 0.5
CCNF-203ENST00000564236 ZBTB41Q5SVQ8 909 aa18.19■□□□□ 0.5
CCNF-203ENST00000564236 RPF1Q9H9Y2 349 aaKnown RBP18.19■□□□□ 0.5
CCNF-203ENST00000564236 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
CCNF-203ENST00000564236 OR6C75A6NL08 312 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 STK25O00506 426 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 PPP1R37O75864 691 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 VNN2O95498 520 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 GLULP15104 373 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 CEBPBP17676 345 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 RFX1P22670 979 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 MARCKSP29966 332 aaPredicted RBP18.18■□□□□ 0.5
CCNF-203ENST00000564236 CCR2P41597 374 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 MATR3P43243 847 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCNF-203ENST00000564236 MAGEA9P43362 315 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 ADCY1Q08828 1119 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 C1orf210Q8IVY1 113 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 ST13P5Q8NFI4 369 aaPredicted RBP18.18■□□□□ 0.5
CCNF-203ENST00000564236 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 HVCN1Q96D96 273 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 KXD1Q9BQD3 176 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 STRA6Q9BX79 667 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 ASB7Q9H672 318 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 CEP72Q9P209 647 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 HSFX1Q9UBD0 423 aa18.18■□□□□ 0.5
CCNF-203ENST00000564236 FBXO2Q9UK22 296 aaPredicted RBP18.18■□□□□ 0.5
CCNF-203ENST00000564236 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms