RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CD99L2Q8TCZ2 262 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 PLEKHO2Q8TD55 490 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 ANKRD36BP1Q96IX9 119 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 FAM49AQ9H0Q0 323 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 CDT1Q9H211 546 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 TRIP12Q14669 1992 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 A0A1B0GUA9 196 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 B4GALT4O60513 344 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 TSPAN1O60635 241 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PHACTR2O75167 634 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ADAMTS4O75173 837 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 TNNC2P02585 160 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 EDN1P05305 212 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 GJB1P08034 283 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 TMEM191BP0C7N4 346 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 DARSP14868 501 aaKnown RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 RAB15P59190 212 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PTPN11Q06124 597 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 DRAP1Q14919 205 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 DUOXA2Q1HG44 320 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 KIZQ2M2Z5 673 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 CCDC122Q5T0U0 273 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 SLC27A1Q6PCB7 646 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 CATSPER4Q7RTX7 472 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 IRF2BP2Q7Z5L9 587 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 RPAINQ86UA6 219 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PPM1KQ8N3J5 372 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ACRBPQ8NEB7 543 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ZSWIM2Q8NEG5 633 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 TAS1R2Q8TE23 839 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 FAXDC2Q96IV6 333 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ZBTB45Q96K62 511 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 TSPAN18Q96SJ8 248 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 HAPLN2Q9GZV7 340 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PDZD7Q9H5P4 517 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 ASB7Q9H672 318 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 MINDY3Q9H8M7 445 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PDE11AQ9HCR9 933 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 UBE2TQ9NPD8 197 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 DDX20Q9UHI6 824 aaKnown RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
UBFD1-202ENST00000563366 PDCD11Q14690 1871 aaKnown RBP10.44□□□□□ -0.74
UBFD1-202ENST00000563366 B4GALT5O43286 388 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 GPR32O75388 356 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 C4BPAP04003 597 aaKnown RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 ELNP15502 786 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 EIF4BP23588 611 aaKnown RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 CRYBB1P53674 252 aaPredicted RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 BPIFB4P59827 614 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 GNG11P61952 73 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 ARID5AQ03989 594 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 TUBB2AQ13885 445 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 ASTE1Q2TB18 679 aaPredicted RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 DNAJB3Q8WWF6 145 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 TAF4BQ92750 862 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 ZBTB10Q96DT7 871 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 TUBB2BQ9BVA1 445 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 CCDC94Q9BW85 323 aaPredicted RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 SEZ6LQ9BYH1 1024 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 ADAMTS10Q9H324 1103 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 FAM124BQ9H5Z6 455 aaPredicted RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 TOPORSQ9NS56 1045 aaPredicted RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 INTUQ9ULD6 942 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
UBFD1-202ENST00000563366 PCDHB11Q9Y5F2 797 aa10.43□□□□□ -0.74
UBFD1-202ENST00000563366 PJA2O43164 708 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TREHO43280 583 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PGK1P00558 417 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 HLA-DRAP01903 254 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 ASGR1P07306 291 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PLEKP08567 350 aaPredicted RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 STAG3L1P0CL83 205 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 CASQ1P31415 396 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TNFSF9P41273 254 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 GRM5P41594 1212 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 MAGEA1P43355 309 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PDE6CP51160 858 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 YARSP54577 528 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 YWHAEP62258 255 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 APBA1Q02410 837 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TRPC3Q13507 836 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 ENOX2Q16206 610 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 ARHGAP44Q17R89 818 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 FAM47CQ5HY64 1035 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TDRD10Q5VZ19 366 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 EEF1DP3Q658K8 133 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PPP1R2P3Q6NXS1 205 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 CXCL17Q6UXB2 119 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 SYT10Q6XYQ8 523 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 THNSL1Q8IYQ7 743 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms