RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 LOXL4Q96JB6 756 aa20.25■□□□□ 0.83
KATNB1-202ENST00000562542 HSD17B14Q9BPX1 270 aa20.25■□□□□ 0.83
KATNB1-202ENST00000562542 LSM14BQ9BX40 385 aaKnown RBP20.25■□□□□ 0.83
KATNB1-202ENST00000562542 TRPV4Q9HBA0 871 aa20.25■□□□□ 0.83
KATNB1-202ENST00000562542 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
KATNB1-202ENST00000562542 NCANO14594 1321 aa20.25■□□□□ 0.83
KATNB1-202ENST00000562542 SPECC1L-ADORA2AF8WAN1 911 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 RPP40O75818 363 aaKnown RBP20.24■□□□□ 0.83
KATNB1-202ENST00000562542 EPN2O95208 641 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 ATP2B1P20020 1258 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 HOXC13P31276 330 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 EVCP57679 992 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 EEF1DP3Q658K8 133 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 TPGS2Q68CL5 300 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 MCPH1Q8NEM0 835 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 DEPTORQ8TB45 409 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 GAB3Q8WWW8 586 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 KCNB2Q92953 911 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
KATNB1-202ENST00000562542 SMOC1Q9H4F8 434 aa20.24■□□□□ 0.83
KATNB1-202ENST00000562542 CHADO15335 359 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 CDC45O75419 566 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 MOSPD3O75425 235 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 HOXA6P31267 233 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 PXNP49023 591 aaPredicted RBP20.23■□□□□ 0.83
KATNB1-202ENST00000562542 STK3Q13188 491 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 PON2Q15165 354 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 CTXN3Q4LDR2 81 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 RNF43Q68DV7 783 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 TXNDC11Q6PKC3 985 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 KBTBD6Q86V97 674 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 GPR88Q9GZN0 384 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 CEP72Q9P209 647 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 FBXL5Q9UKA1 691 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 GREB1Q4ZG55 1949 aa20.23■□□□□ 0.83
KATNB1-202ENST00000562542 ACKR2O00590 384 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 XBP1P17861 261 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 CTHP32929 405 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 HSPA4P34932 840 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 NOVA1P51513 510 aaKnown RBP20.22■□□□□ 0.83
KATNB1-202ENST00000562542 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
KATNB1-202ENST00000562542 FOXC1Q12948 553 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 WDR44Q5JSH3 913 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
KATNB1-202ENST00000562542 RALGPS2Q86X27 583 aaPredicted RBP20.22■□□□□ 0.83
KATNB1-202ENST00000562542 GPIHBP1Q8IV16 184 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 OXER1Q8TDS5 423 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 NUB1Q9Y5A7 615 aa20.22■□□□□ 0.83
KATNB1-202ENST00000562542 MYBPHLA2RUH7 354 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 PODXLO00592 558 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 SYN3O14994 580 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 MPLP40238 635 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
KATNB1-202ENST00000562542 CALCRLQ16602 461 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 HAUS6Q7Z4H7 955 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 SHKBP1Q8TBC3 707 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 RSPRY1Q96DX4 576 aa20.21■□□□□ 0.83
KATNB1-202ENST00000562542 LARP6Q9BRS8 491 aaKnown RBP20.21■□□□□ 0.83
KATNB1-202ENST00000562542 TTC12Q9H892 705 aaPredicted RBP20.21■□□□□ 0.83
KATNB1-202ENST00000562542 PDCD11Q14690 1871 aaKnown RBP20.2■□□□□ 0.82
KATNB1-202ENST00000562542 SMIM28A0A1B0GU29 152 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 DPYSL4O14531 572 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 EXTL3O43909 919 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 EDN1P05305 212 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 CPB1P15086 417 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 RAP1GAPP47736 663 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 EPHA5P54756 1037 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 SOX4Q06945 474 aaPredicted RBP20.2■□□□□ 0.82
KATNB1-202ENST00000562542 FCHO2Q0JRZ9 810 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
KATNB1-202ENST00000562542 ATF7IP2Q5U623 682 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 ZNF280DQ6N043 979 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 SYNPOQ8N3V7 929 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 BSNDQ8WZ55 320 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 ZFYVE19Q96K21 471 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 VPS45Q9NRW7 570 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
KATNB1-202ENST00000562542 SLC38A7Q9NVC3 462 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 GTSE1Q9NYZ3 720 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 AFF4Q9UHB7 1163 aaKnown RBP20.2■□□□□ 0.82
KATNB1-202ENST00000562542 PCDHGA5Q9Y5G8 931 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 SDK1Q7Z5N4 2213 aa20.2■□□□□ 0.82
KATNB1-202ENST00000562542 ZZEF1O43149 2961 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 A0A1W2PRU2 124 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 XRCC6P12956 609 aaKnown RBP eCLIP20.19■□□□□ 0.82
KATNB1-202ENST00000562542 TXKP42681 527 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 CCINQ13939 588 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 EARS2Q5JPH6 523 aaKnown RBP20.19■□□□□ 0.82
KATNB1-202ENST00000562542 PLA2G2CQ5R387 149 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 KDF1Q8NAX2 398 aaPredicted RBP20.19■□□□□ 0.82
KATNB1-202ENST00000562542 GJB4Q9NTQ9 266 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 SLC8A2Q9UPR5 921 aa20.19■□□□□ 0.82
KATNB1-202ENST00000562542 ZFYVE26Q68DK2 2539 aa20.18■□□□□ 0.82
KATNB1-202ENST00000562542 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
KATNB1-202ENST00000562542 SPINK2P20155 84 aa20.18■□□□□ 0.82
KATNB1-202ENST00000562542 NAMPTP43490 491 aa20.18■□□□□ 0.82
KATNB1-202ENST00000562542 OSTNP61366 133 aa20.18■□□□□ 0.82
KATNB1-202ENST00000562542 ZNF252P-AS1Q0IIN9 211 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms