RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 CACNA1HO95180 2353 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 VPS13AQ96RL7 3174 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 TISP43B9A030 160 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 PODXLO00592 558 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 TRAPPC3O43617 180 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 CYP3A5P20815 502 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 CMA1P23946 247 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 TDGQ13569 410 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 POSTNQ15063 836 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 SMG7Q92540 1137 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 ACCSQ96QU6 501 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 FGFBP2Q9BYJ0 223 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 RPF1Q9H9Y2 349 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 EPS15L1Q9UBC2 864 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 DUSP12Q9UNI6 340 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 EXOC7Q9UPT5 735 aa16.51■□□□□ 0.23
SNRPA1-210ENST00000560383 CITO14578 2027 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 FAM237AA0A1B0GTK4 181 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 LACTBL1A8MY62 500 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 N4BP1O75113 896 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 RFPL2O75678 378 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 GCNT3O95395 438 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 MYBP10242 640 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 LRPAP1P30533 357 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 EHHADHQ08426 723 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 PRSS55Q6UWB4 352 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 PALB2Q86YC2 1186 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 NXPE3Q969Y0 559 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 SPATA32Q96LK8 384 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 CLSTN3Q9BQT9 956 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 IKZF4Q9H2S9 585 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 KCNK12Q9HB15 430 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 FBXW11Q9UKB1 542 aa16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 AGO2Q9UKV8 859 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-210ENST00000560383 ZMYND10O75800 440 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 HOXA9P31269 272 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 CLCN5P51795 746 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 PDCD11Q14690 1871 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 PSMD5Q16401 504 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 CRELD2Q6UXH1 353 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 ASB7Q9H672 318 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 TMEM206Q9H813 350 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 HPSEQ9Y251 543 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 DERAQ9Y315 318 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 BACE2Q9Y5Z0 518 aa16.49■□□□□ 0.23
SNRPA1-210ENST00000560383 DMDP11532 3685 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 PVALEFA0A1B0GWK0 134 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 SYN3O14994 580 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 POU2F2P09086 479 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 HNRNPA1P09651 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 SPATA31D3P0C874 917 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 RPL17P18621 184 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 GARTP22102 1010 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 TKTP29401 623 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 BRCC3P46736 316 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 ACOT2P49753 483 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 ASIC1P78348 528 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 ASTLQ6HA08 431 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 SPATA31D4Q6ZUB0 917 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 UNC13DQ70J99 1090 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 EPM2AIP1Q7L775 607 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 POMGNT1Q8WZA1 660 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 SUSD3Q96L08 255 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 MFSD1Q9H3U5 465 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 PIDD1Q9HB75 910 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 MTRRQ9UBK8 725 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 ZFP37Q9Y6Q3 630 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-210ENST00000560383 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 I3L4J1 428 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 EIF3DO15371 548 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 TBC1D4O60343 1298 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 PRPF6O94906 941 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 PFKFB1P16118 471 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 GBP2P32456 591 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 HOXD13P35453 343 aa16.47■□□□□ 0.23
SNRPA1-210ENST00000560383 SPAG1Q07617 926 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms