RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 OSBPL6Q9BZF3 934 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
CASC4-205ENST00000558735 NUMBLQ9Y6R0 609 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 ZFHX4Q86UP3 3567 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 CFAP47Q6ZTR5 3102 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 SYN3O14994 580 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
CASC4-205ENST00000558735 XYLBO75191 536 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CLTAP09496 248 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 GPC5P78333 572 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 ROR1Q01973 937 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 SPAG1Q07617 926 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CUL4AQ13619 759 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 MCM6Q14566 821 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
CASC4-205ENST00000558735 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
CASC4-205ENST00000558735 GPBP1Q86WP2 473 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 NELL1Q92832 810 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 ANKFY1Q9P2R3 1169 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 ODF2LQ9ULJ1 636 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 PCDHGA2Q9Y5H1 932 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 CACNA1IQ9P0X4 2223 aa12.57□□□□□ -0.4
CASC4-205ENST00000558735 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 WDR27A2RRH5 827 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 LACTBL1A8MY62 500 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 KRT37O76014 449 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 SEC24AO95486 1093 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 ADRB2P07550 413 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 CXCL8P10145 99 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 ATF2P15336 505 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 DDIT3P35638 169 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
CASC4-205ENST00000558735 TNFSF9P41273 254 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 MAGEA9P43362 315 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 ZNF131P52739 623 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 ARPP19P56211 112 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
CASC4-205ENST00000558735 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 ZBTB44Q8NCP5 570 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 RAD54LQ92698 747 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 TUBGCP4Q9UGJ1 667 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 FBXL5Q9UKA1 691 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 NUB1Q9Y5A7 615 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
CASC4-205ENST00000558735 NOTCH4Q99466 2003 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PRR5-ARHGAP8B1AHC4 643 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 H0YCG3 227 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 H7C4K7 107 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 TRAK2O60296 914 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 FAM189A1O60320 539 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 BMP15O95972 392 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PIGRP01833 764 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 RHOP08100 348 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PTPN2P17706 415 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PLCG1P19174 1290 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 LRPAP1P30533 357 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 ELF1P32519 619 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.4
CASC4-205ENST00000558735 ARHGAP8P85298 464 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PRKCQQ04759 706 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PTPAQ15257 358 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 CTXN3Q4LDR2 81 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
CASC4-205ENST00000558735 ZBTB41Q5SVQ8 909 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 TCEAL8Q8IYN2 117 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 DDX12PQ92771 950 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 EPSTI1Q96J88 318 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 CCSER1Q9C0I3 900 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
CASC4-205ENST00000558735 AVENQ9NQS1 362 aaPredicted RBP12.55□□□□□ -0.4
CASC4-205ENST00000558735 MRPS23Q9Y3D9 190 aaKnown RBP12.55□□□□□ -0.4
CASC4-205ENST00000558735 A0A0B4J269 797 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 PRRG1O14668 218 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 OGTO15294 1046 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 LILRB5O75023 590 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 FAM13AO94988 1023 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 CYP3A5P20815 502 aa12.54□□□□□ -0.4
CASC4-205ENST00000558735 MARCKSP29966 332 aaPredicted RBP12.54□□□□□ -0.4
CASC4-205ENST00000558735 NMT1P30419 496 aaKnown RBP12.54□□□□□ -0.4
CASC4-205ENST00000558735 MCM4P33991 863 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms