RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 GPATCH11Q8N954 259 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 SNTG2Q9NY99 539 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 NOC2LQ9Y3T9 749 aaKnown RBP11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 ALG6Q9Y672 507 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 COMTP21964 271 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 IQSEC1Q6DN90 963 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 TREHO43280 583 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 ITGA4P13612 1032 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 ELNP15502 786 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 CHRNB2P17787 502 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 TNNC1P63316 161 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 MFSD10Q14728 455 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 TWF2Q6IBS0 349 aaKnown RBP11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 VPS18Q9P253 973 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
CSPG4P5-201ENST00000558731 MAPK13O15264 365 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 ASAP2O43150 1006 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 AOC2O75106 756 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 SCP2P22307 547 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 C1orf131Q8NDD1 294 aaKnown RBP11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 KRT35Q92764 455 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 FAM118BQ9BPY3 351 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 GCOM2Q9BZD3 368 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 CISHQ9NSE2 258 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 KAT6AQ92794 2004 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 MYO1FO00160 1098 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 PGRMC1O00264 195 aaKnown RBP11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 FLT3LGP49771 235 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 UBL4BQ8N7F7 174 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
CSPG4P5-201ENST00000558731 CCDC151A5D8V7 595 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 MYO1CO00159 1063 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 VPS41P49754 854 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 YARSP54577 528 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 BPIFB4P59827 614 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 SNX1Q13596 522 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 RHOT2Q8IXI1 618 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 ABRAQ8N0Z2 381 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 HEXIM2Q96MH2 286 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 RUFY1Q96T51 708 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 HEMGNQ9BXL5 484 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 ANKRD65E5RJM6 399 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 TRPA1O75762 1119 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 GCNT1Q02742 428 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 TMEM132DQ14C87 1099 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 FSCN1Q16658 493 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 SEL1L2Q5TEA6 688 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 LIN9Q5TKA1 542 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 KAZNQ674X7 775 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 DDX42Q86XP3 938 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 NOCTQ9UK39 431 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 SNX9Q9Y5X1 595 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 TRIM32Q13049 653 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 BRD3Q15059 726 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 MAP9Q49MG5 647 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 RUFY4Q6ZNE9 571 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 RNPC3Q96LT9 517 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
CSPG4P5-201ENST00000558731 MYBL2P10244 700 aa11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 NT5DC3Q86UY8 548 aa11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 SMYD3Q9H7B4 428 aa11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 GABRQQ9UN88 632 aa11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 COQ4Q9Y3A0 265 aa11.52□□□□□ -0.56
CSPG4P5-201ENST00000558731 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 PSEN2P49810 448 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 MCL1Q07820 350 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 SREBF2Q12772 1141 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 MAMDC4Q6UXC1 1216 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 FZD8Q9H461 694 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 PDZD7Q9H5P4 517 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 FAM49BQ9NUQ9 324 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 MYADML2A6NDP7 307 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms