RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 RTL10Q7L3V2 364 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 GPD1LQ8N335 351 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 C12orf76Q8N812 135 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 KREMEN2Q8NCW0 462 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 LNX1Q8TBB1 728 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 ACSF2Q96CM8 615 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 PAGE5Q96GU1 130 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 SUSD3Q96L08 255 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 ZNF560Q96MR9 790 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 MTRRQ9UBK8 725 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 TUBGCP4Q9UGJ1 667 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 SPTBN5Q9NRC6 3674 aaKnown RBP14.96□□□□□ -0.01
VPS33B-206ENST00000557358 CCDC195A0A1B0GUA6 201 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 ZNF233A6NK53 670 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 TISP43B9A030 160 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 I3L4J1 428 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 FAM189A1O60320 539 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 XYLBO75191 536 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 ADRB2P07550 413 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 PNPLA4P41247 253 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 KCNA1Q09470 495 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 CUL4BQ13620 913 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
VPS33B-206ENST00000557358 GPR149Q86SP6 731 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 METTL23Q86XA0 190 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 BRSK2Q8IWQ3 736 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 ZNF507Q8TCN5 953 aa14.96□□□□□ -0.01
VPS33B-206ENST00000557358 C19orf67A6NJJ6 358 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 DCXO43602 365 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 ACTN4O43707 911 aaKnown RBP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 NFICP08651 508 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 SPATA31D3P0C874 917 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 ODC1P11926 461 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 ADSSP30520 456 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 OR1D2P34982 312 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 NDUFA8P51970 172 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 TFAMQ00059 246 aaKnown RBP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 YWHAHQ04917 246 aaPredicted RBP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 RAB33AQ14088 237 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 ZBTB6Q15916 424 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 UVSSAQ2YD98 709 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 CTXN3Q4LDR2 81 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 SPATA31D4Q6ZUB0 917 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 TDRD5Q8NAT2 981 aaKnown RBP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 SMG7Q92540 1137 aaKnown RBP14.95□□□□□ -0.02
VPS33B-206ENST00000557358 SAAL1Q96ER3 474 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 CLSTN3Q9BQT9 956 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 RHOBTB2Q9BYZ6 727 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 PCIF1Q9H4Z3 704 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 GDPD2Q9HCC8 539 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 SLC39A2Q9NP94 309 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 DPP3Q9NY33 737 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 DSEQ9UL01 958 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 HPSEQ9Y251 543 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 CDY1Q9Y6F8 540 aa14.95□□□□□ -0.02
VPS33B-206ENST00000557358 FAM237AA0A1B0GTK4 181 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 PRRG1O14668 218 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 ZMYND10O75800 440 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 TNNC2P02585 160 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 TMEM191BP0C7N4 346 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 TAF6P49848 677 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 ARPP19P56211 112 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 KNOP1Q1ED39 458 aaKnown RBP14.94□□□□□ -0.02
VPS33B-206ENST00000557358 SV2CQ496J9 727 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 NELFCDQ8IXH7 590 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 ANKRD36BP1Q96IX9 119 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 POMKQ9H5K3 350 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 HSPBP1Q9NZL4 362 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 FBXW11Q9UKB1 542 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 MAFFQ9ULX9 164 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 USTQ9Y2C2 406 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 VWA8A3KMH1 1905 aa14.94□□□□□ -0.02
VPS33B-206ENST00000557358 GOLGA8IPA6NC78 632 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 OR6C75A6NL08 312 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 GOLGA8JA6NMD2 632 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 LOC730098B7Z3J9 87 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 M0QZQ0 153 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 MEFVO15553 781 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-206ENST00000557358 PRPF40AO75400 957 aaKnown RBP14.93□□□□□ -0.02
VPS33B-206ENST00000557358 ZNF202O95125 648 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 C8AP07357 584 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 WEE2P0C1S8 567 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 CPB1P15086 417 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 TYMPP19971 482 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 HOXA9P31269 272 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms