RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 TRIM4Q9C037 500 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 NMRK1Q9NWW6 199 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 NEU2Q9Y3R4 380 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 LOXHD1Q8IVV2 1947 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 TCRBV7S2A1N4TA0A589 114 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 CCDC22O60826 627 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 PSMC4P43686 418 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 MYL7Q01449 175 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 KYNUQ16719 465 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 SGO2Q562F6 1265 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 SRRM1Q8IYB3 904 aaKnown RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 ATL2Q8NHH9 583 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 AZIN2Q96A70 460 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 TTC25Q96NG3 672 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 TDRD3Q9H7E2 651 aaKnown RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 ASIC3Q9UHC3 531 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 FRMD4BQ9Y2L6 1034 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.33□□□□□ -0.28
APEX1-216ENST00000557159 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
APEX1-216ENST00000557159 RASA4BC9J798 803 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 RASA4O43374 803 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 EXOC3O60645 756 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ZBED4O75132 1171 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 ATF2P15336 505 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 EPHB2P29323 1055 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ITGA8P53708 1063 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PTP4A2Q12974 167 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.282e-8■■■□□ 18.9
APEX1-216ENST00000557159 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 CTC1Q2NKJ3 1217 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CBWD6Q4V339 395 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 FAM91A1Q658Y4 838 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 KCND2Q9NZV8 630 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 DLGAP2Q9P1A6 1054 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PCDH10Q9P2E7 1040 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 STX18Q9P2W9 335 aaKnown RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 ZNF212Q9UDV6 495 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 FETUBQ9UGM5 382 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 ANAPC5Q9UJX4 755 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 A8MXQ7 604 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CLIC2O15247 247 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 SPOPO43791 374 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 TJP3O95049 919 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CETPP11597 493 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CIITAP33076 1130 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 KCNJ1P48048 391 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PSMC6P62333 389 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CDR2Q01850 454 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 AP1B1Q10567 949 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CETN1Q12798 172 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 BFSP1Q12934 665 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 MESDQ14696 234 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 CCDC89Q8N998 374 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 SLC17A8Q8NDX2 589 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
APEX1-216ENST00000557159 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 PGAP2Q9UHJ9 254 aa13.32□□□□□ -0.28
APEX1-216ENST00000557159 ASTN2O75129 1339 aaPredicted RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 NDC80O14777 642 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 DNAJC6O75061 913 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
APEX1-216ENST00000557159 PDHA1P08559 390 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 CHRNB2P17787 502 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 RFC5P40937 340 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 ARHGAP22Q7Z5H3 698 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 SMC1BQ8NDV3 1235 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 GJA10Q969M2 543 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 FGD4Q96M96 766 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
APEX1-216ENST00000557159 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms