RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 RIC8BQ9NVN3 520 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 TMOD4Q9NZQ9 345 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 HMG20BQ9P0W2 317 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 C11orf21Q9P2W6 132 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 NR2E1Q9Y466 385 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 AFG3L2Q9Y4W6 797 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 ZNF646O15015 1829 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-240ENST00000556339 MROH7-TTC4A0A0A0MT08 1334 aa4.69□□□□□ -1.66
ATXN3-240ENST00000556339 MYO9BQ13459 2157 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 A0A1B0GUL6 1792 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 PNMA6EA0A0J9YXQ4 647 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 H0YGN5 161 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 HLA-DOAP06340 250 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 TRIM27P14373 513 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 PTMSP20962 102 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 FLT3LGP49771 235 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 HMGCS2P54868 508 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 PRKCZQ05513 592 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 IFRD2Q12894 506 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 HDAC1Q13547 482 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 AGBL4Q5VU57 503 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 FOXP4Q8IVH2 680 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 C1orf210Q8IVY1 113 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 MAPKAPK5Q8IW41 473 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 TGFBRAP1Q8WUH2 860 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 HNRNPLLQ8WVV9 542 aaKnown RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 EDAQ92838 391 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 EXTL1Q92935 676 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 NSUN4Q96CB9 384 aaKnown RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 PLEKHG4BQ96PX9 1271 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 DPYSL5Q9BPU6 564 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 ZFYVE21Q9BQ24 234 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 CCDC8Q9H0W5 538 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 AATFQ9NY61 560 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 KIAA1522Q9P206 1035 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 PI4KBQ9UBF8 816 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 SAP30BPQ9UHR5 308 aaKnown RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 ISY1Q9ULR0 285 aaKnown RBP4.68□□□□□ -1.66
ATXN3-240ENST00000556339 GABRQQ9UN88 632 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 TNNQ9UQP3 1299 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 TELO2Q9Y4R8 837 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 CENPFP49454 3210 aa4.68□□□□□ -1.66
ATXN3-240ENST00000556339 OTOFQ9HC10 1997 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 RPAP1Q9BWH6 1393 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 IDH1O75874 414 aaKnown RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 IL18BPO95998 194 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 HMGCRP04035 888 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 GJB1P08034 283 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 GCLCP48506 637 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 RNF151Q2KHN1 245 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 L1TD1Q5T7N2 865 aaKnown RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 WDR78Q5VTH9 848 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 BTBD8Q5XKL5 378 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 NSMFQ6X4W1 530 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 DEFB118Q96PH6 123 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 FEZ1Q99689 392 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 DHX36Q9H2U1 1008 aaKnown RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 IPPKQ9H8X2 491 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 CABP5Q9NP86 173 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 HERC5Q9UII4 1024 aaKnown RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 DDX19BQ9UMR2 479 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 AGTPBP1Q9UPW5 1226 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 SLC45A1Q9Y2W3 748 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 FPGT-TNNI3KV9GXZ4 949 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 GAKO14976 1311 aa4.67□□□□□ -1.66
ATXN3-240ENST00000556339 PDS5AQ29RF7 1337 aaKnown RBP4.67□□□□□ -1.66
ATXN3-240ENST00000556339 ARAP2Q8WZ64 1704 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 TRAV20A0A0B4J274 112 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 BLACEA4D250 179 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 C19orf81C9J6K1 198 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MPHOSPH10O00566 681 aaKnown RBP4.66□□□□□ -1.66
ATXN3-240ENST00000556339 GLRX3O76003 335 aaKnown RBP4.66□□□□□ -1.66
ATXN3-240ENST00000556339 SGPL1O95470 568 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 ASNSP08243 561 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 PABPC1P11940 636 aaKnown RBP4.66□□□□□ -1.66
ATXN3-240ENST00000556339 CYP2B6P20813 491 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 CTGFP29279 349 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 ADCY8P40145 1251 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MCAMP43121 646 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 KCNQ1P51787 676 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 RHBDL3P58872 404 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 ARID5AQ03989 594 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MAP3K12Q12852 859 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MTX1Q13505 466 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MOGSQ13724 837 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 NOLC1Q14978 699 aaKnown RBP eCLIP4.66□□□□□ -1.66
ATXN3-240ENST00000556339 HSP90AB4PQ58FF6 505 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 OTOP2Q7RTS6 562 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 NECAB2Q7Z6G3 386 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MTDHQ86UE4 582 aaKnown RBP4.66□□□□□ -1.66
ATXN3-240ENST00000556339 AACSQ86V21 672 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 ERC1Q8IUD2 1116 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 NLGN4XQ8N0W4 816 aa4.66□□□□□ -1.66
ATXN3-240ENST00000556339 MAGEB6Q8N7X4 407 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms