RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FGFR3P22607 806 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 ADSSP30520 456 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 POU5F1Q01860 360 aaKnown RBP12.54□□□□□ -0.4
SLIRP-205ENST00000556310 ITIH3Q06033 890 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 EHHADHQ08426 723 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 PSMD5Q16401 504 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 SFXN1Q9H9B4 322 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 DPP7Q9UHL4 492 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 SERTAD1Q9UHV2 236 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 UBE4BO95155 1302 aa12.54□□□□□ -0.4
SLIRP-205ENST00000556310 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 CASP1P29466 404 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 LRPAP1P30533 357 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 SYKP43405 635 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 AFMP43652 599 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 BRCC3P46736 316 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 ACOT2P49753 483 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 SPAG1Q07617 926 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 CUL4BQ13620 913 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 CBX2Q14781 532 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 ZBTB6Q15916 424 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 EPM2AIP1Q7L775 607 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 GJD3Q8N144 294 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 GLIS3Q8NEA6 775 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 LNX1Q8TBB1 728 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 HPS3Q969F9 1004 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 APOL5Q9BWW9 433 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 PHF7Q9BWX1 381 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-205ENST00000556310 BLZF1Q9H2G9 400 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 ASB7Q9H672 318 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 MAN1C1Q9NR34 630 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 DERAQ9Y315 318 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
SLIRP-205ENST00000556310 I3L4J1 428 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 SYN3O14994 580 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 LDHAP00338 332 aaKnown RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 MYL1P05976 194 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 NFICP08651 508 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 RPL17P18621 184 aaKnown RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 MTHFRP42898 656 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 NDUFA8P51970 172 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 JADE1Q6IE81 842 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 FSIP1Q8NA03 581 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 CMASQ8NFW8 434 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-205ENST00000556310 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 RIPOR3Q96MK2 946 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 CD320Q9NPF0 282 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 C2CD2Q9Y426 696 aa12.52□□□□□ -0.41
SLIRP-205ENST00000556310 SCN1AP35498 2009 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
SLIRP-205ENST00000556310 TGM5O43548 720 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 IL18RAPO95256 599 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 MCM4P33991 863 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 HOXD13P35453 343 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 AARSP49588 968 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLIRP-205ENST00000556310 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 C15orf39Q6ZRI6 1047 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 BRSK2Q8IWQ3 736 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 C12orf76Q8N812 135 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF507Q8TCN5 953 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 CLSTN3Q9BQT9 956 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 FAM213AQ9BRX8 229 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 CDH22Q9UJ99 828 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 FBXW11Q9UKB1 542 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 BACE2Q9Y5Z0 518 aa12.51□□□□□ -0.41
SLIRP-205ENST00000556310 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 KLRC4O43908 158 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms