RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TARS2Q9BW92 718 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 STMN4Q9H169 189 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 AVENQ9NQS1 362 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 COL11A1P12107 1806 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 MYH9P35579 1960 aaKnown RBP15.5■□□□□ 0.07
ACTN1-211ENST00000553882 MAFGO15525 162 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 PEX10O60683 326 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 PROSCO94903 275 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 CYP1A1P04798 512 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-211ENST00000553882 DRP2Q13474 957 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 PSMD6Q15008 389 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 TNFAIP8L3Q5GJ75 292 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 CRELD2Q6UXH1 353 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ANKS4BQ8N8V4 417 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ACTR5Q9H9F9 607 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-211ENST00000553882 KLC4Q9NSK0 619 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 CYP39A1Q9NYL5 469 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ANAPC5Q9UJX4 755 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 TMEM120BA0PK00 339 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 PI4K2BG5E9Z4 385 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 EDN1P05305 212 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ATP4AP20648 1035 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
ACTN1-211ENST00000553882 SLC1A1P43005 524 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 CUL2Q13617 745 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 PTK6Q13882 451 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ATP13A4Q4VNC1 1196 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 MFSD5Q6N075 450 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 XRRA1Q6P2D8 792 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 SEPT14Q6ZU15 432 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 CROCCP2Q86T23 111 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 MICALL2Q8IY33 904 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 REPS2Q8NFH8 660 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 OR5B17Q8NGF7 314 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 FAM81BQ96LP2 452 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 KCNK9Q9NPC2 374 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 SAMD15Q9P1V8 674 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 GGT7Q9UJ14 662 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 ARID2Q68CP9 1835 aa15.49■□□□□ 0.07
ACTN1-211ENST00000553882 K7ERI5 159 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 DKC1O60832 514 aaKnown RBP eCLIP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 RASSF9O75901 435 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TTC4O95801 387 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 MYBL1P10243 752 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TCF4P15884 667 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 NOMO3P69849 1222 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 KAZNQ674X7 775 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 ATL2Q8NHH9 583 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 C9orf72Q96LT7 481 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 CAMKK2Q96RR4 588 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 MSTO1Q9BUK6 570 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 CD248Q9HCU0 757 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 NUB1Q9Y5A7 615 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GJA3Q9Y6H8 435 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TLR3O15455 904 aaKnown RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GH1P01241 217 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 PTPRAP18433 802 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GLRA2P23416 452 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 RXRBP28702 533 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 RTP1P59025 263 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 BPIFB4P59827 614 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 RPL7AP62424 266 aaKnown RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 NOP14P78316 857 aaKnown RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 KLF1Q13351 362 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 PLCB4Q15147 1175 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 XKR3Q5GH77 459 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF365Q70YC5 407 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GSTA5Q7RTV2 222 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF677Q86XU0 584 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 RBBP8NLQ8NC74 664 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GDAP1Q8TB36 358 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 DEPTORQ8TB45 409 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 GRK7Q8WTQ7 553 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TRIM11Q96F44 468 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TRAIPQ9BWF2 469 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 OSBPL8Q9BZF1 889 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 PICK1Q9NRD5 415 aa15.48■□□□□ 0.07
ACTN1-211ENST00000553882 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
ACTN1-211ENST00000553882 SUPT20HL2P0C7V6 817 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 FDX1P10109 184 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 KRT10P13645 584 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 CLDN10P78369 228 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 SUPT20HL1Q3ZLR7 823 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF394Q53GI3 561 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 LIN9Q5TKA1 542 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 RHOT1Q8IXI2 618 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ABRAQ8N0Z2 381 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ROPN1BQ9BZX4 212 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ROPN1Q9HAT0 212 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 CCT8L1PA6NM43 557 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 PIGWQ7Z7B1 504 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms