RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, human

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCC2-215	ENST00000552931	CLDN3	O15551	220 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	MEFV	O15553	781 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	N4BP1	O75113	896 aa	Known RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	B3GAT3	O94766	335 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LAMP2	P13473	410 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TYMP	P19971	482 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	WEE1	P30291	646 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	UBA7	P41226	1012 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	NASP	P49321	788 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	EPHA5	P54756	1037 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SMARCB1	Q12824	385 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TCF15	Q12870	199 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	STRN3	Q13033	797 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ALCAM	Q13740	583 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SLC39A14	Q15043	492 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CRTC2	Q53ET0	693 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	RTP2	Q5QGT7	225 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	RARS2	Q5T160	578 aa	Known RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	IER5L	Q5T953	404 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SLFN12L	Q6IEE8	588 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ZNF720	Q7Z2F6	126 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	HAUS6	Q7Z4H7	955 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LEMD2	Q8NC56	503 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SPATA18	Q8TC71	538 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	AUTS2	Q8WXX7	1259 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ZMAT2	Q96NC0	199 aa	Known RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PAAF1	Q9BRP4	392 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	DDX23	Q9BUQ8	820 aa	Known RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TARS2	Q9BW92	718 aa	Known RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	OSBPL6	Q9BZF3	934 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	GBP3	Q9H0R5	595 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	KCNK12	Q9HB15	430 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PARVG	Q9HBI0	331 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TRPV5	Q9NQA5	729 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	BMP2K	Q9NSY1	1161 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	GDE1	Q9NZC3	331 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PRG3	Q9Y2Y8	225 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	C2CD2	Q9Y426	696 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CFAP54	Q96N23	3096 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	C2orf16	Q68DN1	1984 aa		6.62	□□□□□ -1.35
SMARCC2-215	ENST00000552931	NOTCH4	Q99466	2003 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	MYH11	P35749	1972 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ANO9	A1A5B4	782 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	VWA3A	A6NCI4	1184 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CCDC169	A6NNP5	214 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PP2D1	A8MPX8	630 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931		F8W810	466 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931		H7C4K7	107 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	KIAA0391	O15091	583 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	OGT	O15294	1046 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	XPOT	O43592	962 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PPP6R2	O75170	966 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	XYLB	O75191	536 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CYP11A1	P05108	521 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SRF	P11831	508 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SYT1	P21579	422 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ID4	P47928	161 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CLCNKB	P51801	687 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SOX4	Q06945	474 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	REST	Q13127	1097 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	MYBPC2	Q14324	1141 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	POSTN	Q15063	836 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PSMD5	Q16401	504 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ZNF568	Q3ZCX4	644 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LONRF3	Q496Y0	759 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	FAM171A1	Q5VUB5	890 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SPATA1	Q5VX52	437 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LLGL2	Q6P1M3	1020 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TMC5	Q6UXY8	1006 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	MAEA	Q7L5Y9	396 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	NOP9	Q86U38	636 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CDR2L	Q86X02	465 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	DEPDC4	Q8N2C3	294 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SLC44A3	Q8N4M1	653 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	C12orf76	Q8N812	135 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	C3orf58	Q8NDZ4	430 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	APPL2	Q8NEU8	664 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	FAM200A	Q8TCP9	573 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LRRC15	Q8TF66	581 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	RIN2	Q8WYP3	895 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	LARP4B	Q92615	738 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	RAD54L	Q92698	747 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ATOH1	Q92858	354 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	DNAJC19	Q96DA6	116 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	RTP3	Q9BQQ7	232 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	KIFC3	Q9BVG8	833 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	HAPLN2	Q9GZV7	340 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	SEMA4A	Q9H3S1	761 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CUEDC2	Q9H467	287 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TRPV4	Q9HBA0	871 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	KLK14	Q9P0G3	267 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	ZMYM5	Q9UJ78	669 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	FBXO2	Q9UK22	296 aa	Predicted RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	CPSF3	Q9UKF6	684 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	TBX20	Q9UMR3	447 aa		6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	UBQLN1	Q9UMX0	589 aa	Known RBP	6.61	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PLXNA3	P51805	1871 aa		6.6	□□□□□ -1.35
SMARCC2-215	ENST00000552931	PDCD11	Q14690	1871 aa	Known RBP	6.6	□□□□□ -1.35
SMARCC2-215	ENST00000552931	KMT2E	Q8IZD2	1858 aa		6.6	□□□□□ -1.35

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