RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZNF512Q96ME7 567 aaPredicted RBP18.54■□□□□ 0.56
CACNB3-222ENST00000552465 ZMAT2Q96NC0 199 aaKnown RBP18.54■□□□□ 0.56
CACNB3-222ENST00000552465 CCDC94Q9BW85 323 aaPredicted RBP18.54■□□□□ 0.56
CACNB3-222ENST00000552465 TOPORSQ9NS56 1045 aaPredicted RBP18.54■□□□□ 0.56
CACNB3-222ENST00000552465 CEP72Q9P209 647 aa18.54■□□□□ 0.56
CACNB3-222ENST00000552465 CHURC1-FNTBB4DL54 471 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 K7ERI5 159 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 FNTBP49356 437 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 OSTNP61366 133 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 CTXN3Q4LDR2 81 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 MFSD6LQ8IWD5 586 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 SPEM1Q8N4L4 309 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 ERMNQ8TAM6 284 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 ZSCAN18Q8TBC5 510 aaPredicted RBP18.53■□□□□ 0.56
CACNB3-222ENST00000552465 PTPRHQ9HD43 1115 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 MAFFQ9ULX9 164 aa18.53■□□□□ 0.56
CACNB3-222ENST00000552465 ARNTLO00327 626 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 MYL4P12829 197 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 KCNE1P15382 129 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 GJA1P17302 382 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 RPL9P32969 192 aaKnown RBP18.52■□□□□ 0.56
CACNB3-222ENST00000552465 CNR2P34972 360 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 EPHA5P54756 1037 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 DMWDQ09019 674 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 TWF1Q12792 350 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 PTGDRQ13258 359 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 PRR23CQ6ZRP0 262 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 LEMD2Q8NC56 503 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 KIFAP3Q92845 792 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 ACO2Q99798 780 aaKnown RBP18.52■□□□□ 0.56
CACNB3-222ENST00000552465 CDT1Q9H211 546 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 AFF4Q9UHB7 1163 aaKnown RBP18.52■□□□□ 0.56
CACNB3-222ENST00000552465 NUB1Q9Y5A7 615 aa18.52■□□□□ 0.56
CACNB3-222ENST00000552465 F5P12259 2224 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 NCANO14594 1321 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 HEPACAM2A8MVW5 462 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 FOSBP53539 338 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 SRSF5Q13243 272 aaKnown RBP18.51■□□□□ 0.55
CACNB3-222ENST00000552465 ANKRD1Q15327 319 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 TEAD2Q15562 447 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 E2F7Q96AV8 911 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 SUSD3Q96L08 255 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 GPR88Q9GZN0 384 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 ASAH2Q9NR71 780 aa18.51■□□□□ 0.55
CACNB3-222ENST00000552465 K7ESF4 209 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 GDF9O60383 454 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 PAPSS2O95340 614 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-222ENST00000552465 MUTP22033 750 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 TRIM29Q14134 588 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 LRRC32Q14392 662 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ECM1Q16610 540 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ME3Q16798 604 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ZNF568Q3ZCX4 644 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ZNF280DQ6N043 979 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 C1orf228Q6PIY5 440 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-222ENST00000552465 LONP2Q86WA8 852 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 NSUN7Q8NE18 718 aaKnown RBP18.5■□□□□ 0.55
CACNB3-222ENST00000552465 APPL2Q8NEU8 664 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 SHKBP1Q8TBC3 707 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 CSGALNACT1Q8TDX6 532 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 C18orf25Q96B23 403 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-222ENST00000552465 RSPRY1Q96DX4 576 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 MSANTD3Q96H12 275 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 ACAP3Q96P50 834 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 BHMT2Q9H2M3 363 aa18.5■□□□□ 0.55
CACNB3-222ENST00000552465 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
CACNB3-222ENST00000552465 COL4A2P08572 1712 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 CHADO15335 359 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 FOXD2O60548 495 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-222ENST00000552465 RNF19BQ6ZMZ0 732 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 YAF2Q8IY57 180 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 DDX12PQ92771 950 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 TARS2Q9BW92 718 aaKnown RBP18.49■□□□□ 0.55
CACNB3-222ENST00000552465 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
CACNB3-222ENST00000552465 TMEM134Q9H6X4 195 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 C8orf33Q9H7E9 229 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-222ENST00000552465 CNTN3Q9P232 1028 aa18.49■□□□□ 0.55
CACNB3-222ENST00000552465 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 MEFVO15553 781 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 OR52Z1P0C646 297 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 MCF2P10911 925 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 MCM4P33991 863 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 CCT6AP40227 531 aaKnown RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 NPTX2P47972 431 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 SOX9P48436 509 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 KPNA1P52294 538 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 FCHO2Q0JRZ9 810 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 ZNF174Q15697 407 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 HEATR6Q6AI08 1181 aaKnown RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 FAM160A2Q8N612 972 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 DDX1Q92499 740 aaKnown RBP18.48■□□□□ 0.55
CACNB3-222ENST00000552465 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 LRRC3Q9BY71 257 aa18.48■□□□□ 0.55
CACNB3-222ENST00000552465 SLITRK6Q9H5Y7 841 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms