RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	MRPS6	P82932	125 aa	Known RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	PDIA5	Q14554	519 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	GPNMB	Q14956	572 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	SHH	Q15465	462 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	IL17A	Q16552	155 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	TMEM240	Q5SV17	173 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	C9orf50	Q5SZB4	431 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	RASIP1	Q5U651	963 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	ARL6IP4	Q66PJ3	421 aa	Known RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	RSPH3	Q86UC2	560 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	TP53INP2	Q8IXH6	220 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	ABI1	Q8IZP0	508 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	LINC01465	Q8N7H1	131 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	FLCN	Q8NFG4	579 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	GRIN3A	Q8TCU5	1115 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	DNAJB3	Q8WWF6	145 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	DYDC2	Q96IM9	177 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	FBXL18	Q96ME1	805 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.41	□□□□□ -1.22	4e-8	■■□□□ 12.6
CNOT2-238	ENST00000552422	POLR3C	Q9BUI4	534 aa	Predicted RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	RAB34	Q9BZG1	259 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	FAM49A	Q9H0Q0	323 aa	Predicted RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	ZSWIM4	Q9H7M6	989 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	CYP26B1	Q9NR63	512 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	NRBP2	Q9NSY0	501 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	FAM8A1	Q9UBU6	413 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	PCOLCE2	Q9UKZ9	415 aa		7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	COL4A4	P53420	1690 aa	Predicted RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	PDCD11	Q14690	1871 aa	Known RBP	7.41	□□□□□ -1.22
CNOT2-238	ENST00000552422	BRWD1	Q9NSI6	2320 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	XIRP2	A4UGR9	3374 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	IGKV6-21	A0A0C4DH24	114 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MAGEB2	O15479	319 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MAF	O75444	373 aa	Predicted RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MED24	O75448	989 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	USP17L7	P0C7H9	530 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	ZSCAN22	P10073	491 aa	Predicted RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	ACR	P10323	421 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	BMP6	P22004	513 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MUT	P22033	750 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	RPA1	P27694	616 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MGAT3	Q09327	533 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	PKP1	Q13835	747 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	CTTN	Q14247	550 aa	Known RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	BECN1	Q14457	450 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	LRIT3	Q3SXY7	679 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MTERF2	Q49AM1	385 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	PLEKHG4	Q58EX7	1191 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	HABP4	Q5JVS0	413 aa	Known RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	HAUS3	Q68CZ6	603 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	PLA2G4F	Q68DD2	849 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	LLGL2	Q6P1M3	1020 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	ZNF365	Q70YC5	407 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	DEFB128	Q7Z7B8	93 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	CATSPER3	Q86XQ3	398 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	TPH2	Q8IWU9	490 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	RPUSD2	Q8IZ73	545 aa	Known RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	KIAA0319L	Q8IZA0	1049 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	NME8	Q8N427	588 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	METTL13	Q8N6R0	699 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	RNF214	Q8ND24	703 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	ERMN	Q8TAM6	284 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	HERVK_113	Q902F9	699 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	ISL2	Q96A47	359 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	RNPC3	Q96LT9	517 aa	Known RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	SH2D3A	Q9BRG2	576 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	DHX33	Q9H6R0	707 aa	Known RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	TUFT1	Q9NNX1	390 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	LRWD1	Q9UFC0	647 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MORC2	Q9Y6X9	1032 aa	Predicted RBP	7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	KDM3A	Q9Y4C1	1321 aa		7.4	□□□□□ -1.22
CNOT2-238	ENST00000552422	MYO7A	Q13402	2215 aa		7.4	□□□□□ -1.23
CNOT2-238	ENST00000552422	COL4A6	Q14031	1691 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	VWA3A	A6NCI4	1184 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	PP2D1	A8MPX8	630 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422		M0QZ92	97 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	PAX4	O43316	350 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	BAIAP3	O94812	1187 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	F13A1	P00488	732 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	FGB	P02675	491 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	VTN	P04004	478 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	ACTN1	P12814	892 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	XRCC6	P12956	609 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	RARRES1	P49788	294 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	CLCN3	P51790	818 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	NPEPPS	P55786	919 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	TMEM62	Q0P6H9	643 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	LPIN1	Q14693	890 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	EMC2	Q15006	297 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	LRRC14	Q15048	493 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	PTPA	Q15257	358 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	SF3A1	Q15459	793 aa	Known RBP	7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	FBXO47	Q5MNV8	452 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	EFCAB12	Q6NXP0	572 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	FAM173B	Q6P4H8	233 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	CNKSR3	Q6P9H4	555 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	OTUD6A	Q7L8S5	288 aa		7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms