RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.9■□□□□ 0.46
RAB5C-209ENST00000552162 CHD8Q9HCK8 2581 aa17.9■□□□□ 0.46
RAB5C-209ENST00000552162 PHLPP2Q6ZVD8 1323 aa17.9■□□□□ 0.46
RAB5C-209ENST00000552162 MAP1BP46821 2468 aaKnown RBP17.89■□□□□ 0.45
RAB5C-209ENST00000552162 MRPL58Q14197 206 aaKnown RBP17.89■□□□□ 0.45
RAB5C-209ENST00000552162 CTXN3Q4LDR2 81 aa17.89■□□□□ 0.45
RAB5C-209ENST00000552162 TPGS2Q68CL5 300 aa17.89■□□□□ 0.45
RAB5C-209ENST00000552162 IQCEQ6IPM2 695 aa17.89■□□□□ 0.45
RAB5C-209ENST00000552162 HS6ST3Q8IZP7 471 aa17.89■□□□□ 0.45
RAB5C-209ENST00000552162 ACO2Q99798 780 aaKnown RBP17.89■□□□□ 0.45
RAB5C-209ENST00000552162 BHMT2Q9H2M3 363 aa17.89■□□□□ 0.45
RAB5C-209ENST00000552162 MOSPD3O75425 235 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 ADRB1P08588 477 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 MYL4P12829 197 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 MUTP22033 750 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 VIPR2P41587 438 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 SATB1Q01826 763 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 TWF1Q12792 350 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 ZNF280DQ6N043 979 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 ZSCAN18Q8TBC5 510 aaPredicted RBP17.88■□□□□ 0.45
RAB5C-209ENST00000552162 NETO1Q8TDF5 533 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 ZNF512Q96ME7 567 aaPredicted RBP17.88■□□□□ 0.45
RAB5C-209ENST00000552162 PTPRHQ9HD43 1115 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 ASAH2Q9NR71 780 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 CEP72Q9P209 647 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 NCANO14594 1321 aa17.88■□□□□ 0.45
RAB5C-209ENST00000552162 CCDC169A6NNP5 214 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 ZNF263O14978 683 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 LRP3O75074 770 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 RETP07949 1114 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 CHRNB1P11230 501 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 KCNE1P15382 129 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 GJA1P17302 382 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 CCNE1P24864 410 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 RPL9P32969 192 aaKnown RBP17.87■□□□□ 0.45
RAB5C-209ENST00000552162 MCM4P33991 863 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 CCT6AP40227 531 aaKnown RBP17.87■□□□□ 0.45
RAB5C-209ENST00000552162 ANAPC15P60006 121 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 ZNF174Q15697 407 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 ECM1Q16610 540 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 LEMD2Q8NC56 503 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 C18orf25Q96B23 403 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-209ENST00000552162 SUSD3Q96L08 255 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 ACAP3Q96P50 834 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 MRPL4Q9BYD3 311 aaKnown RBP17.87■□□□□ 0.45
RAB5C-209ENST00000552162 TRPV4Q9HBA0 871 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 CNTN3Q9P232 1028 aa17.87■□□□□ 0.45
RAB5C-209ENST00000552162 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
RAB5C-209ENST00000552162 RALGAPA1Q6GYQ0 2036 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.86■□□□□ 0.45
RAB5C-209ENST00000552162 ARNTLO00327 626 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 SLC30A4O14863 429 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 CPB1P15086 417 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 NPTX2P47972 431 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 CXCL12P48061 93 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 EPHA5P54756 1037 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 PEX3P56589 373 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 GUCY1B3Q02153 619 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 ORC2Q13416 577 aaPredicted RBP17.86■□□□□ 0.45
RAB5C-209ENST00000552162 SIM2Q14190 667 aaPredicted RBP17.86■□□□□ 0.45
RAB5C-209ENST00000552162 GAS6Q14393 721 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 SAFBQ15424 915 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAB5C-209ENST00000552162 TEAD2Q15562 447 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 PPM1JQ5JR12 505 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 MFSD6LQ8IWD5 586 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 TARS2Q9BW92 718 aaKnown RBP17.86■□□□□ 0.45
RAB5C-209ENST00000552162 SLITRK6Q9H5Y7 841 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 SEMA4GQ9NTN9 838 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 MAFFQ9ULX9 164 aa17.86■□□□□ 0.45
RAB5C-209ENST00000552162 HEPACAM2A8MVW5 462 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 MCF2P10911 925 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
RAB5C-209ENST00000552162 DMP1Q13316 513 aaPredicted RBP17.85■□□□□ 0.45
RAB5C-209ENST00000552162 RNF19BQ6ZMZ0 732 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 PRR23CQ6ZRP0 262 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 TAS1R3Q7RTX0 852 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.85■□□□□ 0.45
RAB5C-209ENST00000552162 SPEM1Q8N4L4 309 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 APPL2Q8NEU8 664 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 DDX12PQ92771 950 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 MSANTD3Q96H12 275 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 TBC1D32Q96NH3 1257 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 TCHPQ9BT92 498 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 TMEM134Q9H6X4 195 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 DDX19AQ9NUU7 478 aaKnown RBP17.85■□□□□ 0.45
RAB5C-209ENST00000552162 ARHGAP28Q9P2N2 729 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 KIAA1024Q9UPX6 916 aa17.85■□□□□ 0.45
RAB5C-209ENST00000552162 USP24Q9UPU5 2620 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 CHURC1-FNTBB4DL54 471 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 ABLIM1O14639 778 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 MEFVO15553 781 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-209ENST00000552162 PROZP22891 400 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 FNTBP49356 437 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
RAB5C-209ENST00000552162 MLLT6P55198 1093 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-209ENST00000552162 DMWDQ09019 674 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 PTGDRQ13258 359 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 LRRC32Q14392 662 aa17.84■□□□□ 0.45
RAB5C-209ENST00000552162 ST3GAL2Q16842 350 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms