RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LMAN1LQ9HAT1 526 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 ASAH2Q9NR71 780 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 CHD8Q9HCK8 2581 aa15.54■□□□□ 0.08
CHMP1A-210ENST00000551981 DCDC2BA2VCK2 349 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF263O14978 683 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 LRP3O75074 770 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 LARGE1O95461 756 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 MCF2P10911 925 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 KCNE1P15382 129 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 TGM1P22735 817 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 CCR2P41597 374 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 DMP1Q13316 513 aaPredicted RBP15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 ZNF174Q15697 407 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 C1orf228Q6PIY5 440 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 VITQ6UXI7 678 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 PRR23BQ6ZRT6 265 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 MAP4K3Q8IVH8 894 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 CEP120Q8N960 986 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 ACAP3Q96P50 834 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 TCHPQ9BT92 498 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 GPR88Q9GZN0 384 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 TRPV4Q9HBA0 871 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 POLD4Q9HCU8 107 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 PARD6AQ9NPB6 346 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 AFF4Q9UHB7 1163 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 KIAA1024Q9UPX6 916 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
CHMP1A-210ENST00000551981 PDCD11Q14690 1871 aaKnown RBP15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 RETP07949 1114 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MYL4P12829 197 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 CPB1P15086 417 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MCM4P33991 863 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 NPTX2P47972 431 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 CXCL12P48061 93 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MLLT6P55198 1093 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 PEX3P56589 373 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 SPEM2Q0P670 501 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 TWF1Q12792 350 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 LRRC32Q14392 662 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 LPAL2Q16609 132 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MFSD6LQ8IWD5 586 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 YAF2Q8IY57 180 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 ZSCAN18Q8TBC5 510 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 NETO1Q8TDF5 533 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 CSGALNACT1Q8TDX6 532 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MSANTD3Q96H12 275 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 SUSD3Q96L08 255 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 ZMAT2Q96NC0 199 aaKnown RBP15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 PTPRHQ9HD43 1115 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 CNTN3Q9P232 1028 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 LRWD1Q9UFC0 647 aa15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 RBM19Q9Y4C8 960 aaKnown RBP15.52■□□□□ 0.08
CHMP1A-210ENST00000551981 MARCKSP29966 332 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 VIPR2P41587 438 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 FXR2P51116 673 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 EPHA5P54756 1037 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 PLD1Q13393 1074 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 SIM2Q14190 667 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 TTC38Q5R3I4 469 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 MPZL3Q6UWV2 235 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 HS6ST3Q8IZP7 471 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 C18orf25Q96B23 403 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 KMT5AQ9NQR1 393 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 DDX19AQ9NUU7 478 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 CEP72Q9P209 647 aa15.51■□□□□ 0.07
CHMP1A-210ENST00000551981 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 FOXD2O60548 495 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 KRT37O76014 449 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 ADRB1P08588 477 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 HARSP12081 509 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 PROZP22891 400 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 CCNE1P24864 410 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 CNR2P34972 360 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 GNL2Q13823 731 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 ECM1Q16610 540 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 SPEM1Q8N4L4 309 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 DDX12PQ92771 950 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 C8orf76Q96K31 380 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 TBC1D32Q96NH3 1257 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 TARS2Q9BW92 718 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 OXCT2Q9BYC2 517 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 C17orf75Q9HAS0 396 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 ARHGAP28Q9P2N2 729 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 NOL7Q9UMY1 257 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 PCDHB8Q9UN66 801 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 DNM3Q9UQ16 869 aa15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 MAP1BP46821 2468 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-210ENST00000551981 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-210ENST00000551981 HEPACAM2A8MVW5 462 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms