RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 LMO3Q8TAP4 145 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 FAM193BQ96PV7 902 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-207ENST00000550504 KANSL3Q9P2N6 904 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-207ENST00000550504 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 COL6A3P12111 3177 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 H0YGN5 161 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 PODXLO00592 558 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 EPHB6O15197 1021 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 ATP2A2P16615 1042 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 CDC25BP30305 580 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 LRPAP1P30533 357 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 OR1G1P47890 313 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 CLCNKBP51801 687 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 SGSM1Q2NKQ1 1148 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 ARHGEF19Q8IW93 802 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 CPLX3Q8WVH0 158 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 TATDN2Q93075 761 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 HPDLQ96IR7 371 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 NT5C1BQ96P26 610 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 YME1L1Q96TA2 773 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 PAAF1Q9BRP4 392 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 IMPG2Q9BZV3 1241 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 MTIF3Q9H2K0 278 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 NRDE2Q9H7Z3 1164 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 SIX2Q9NPC8 291 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
RAB5C-207ENST00000550504 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 PTPRSQ13332 1948 aa11.07□□□□□ -0.64
RAB5C-207ENST00000550504 FNDC1Q4ZHG4 1894 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PIRO00625 290 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ZC3H11AO75152 810 aaKnown RBP eCLIP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 NOL4O94818 638 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ASS1P00966 412 aaKnown RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 IGFBP6P24592 240 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 NOP14P78316 857 aaKnown RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 DSC1Q08554 894 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 SHHQ15465 462 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 KLHDC7AQ5VTJ3 777 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PHLDB3Q6NSJ2 640 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 DPY19L2P1Q6NXN4 242 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 SCARA5Q6ZMJ2 495 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 COLGALT2Q8IYK4 626 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 LRRC43Q8N309 656 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PPM1KQ8N3J5 372 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 HASPINQ8TF76 798 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 TAF4BQ92750 862 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 KAT5Q92993 513 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ZNF689Q96CS4 500 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 XYLT2Q9H1B5 865 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 GANQ9H2C0 597 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 APOBEC3GQ9HC16 384 aaKnown RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 AJAP1Q9UKB5 411 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 POLIQ9UNA4 740 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 PRG3Q9Y2Y8 225 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-207ENST00000550504 NUB1Q9Y5A7 615 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.641e-7■□□□□ 8.6
RAB5C-207ENST00000550504 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 A0A0C4DFX4 3053 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
RAB5C-207ENST00000550504 COL4A6Q14031 1691 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 F8W810 466 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 SPTLC1O15269 473 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 B3GAT3O94766 335 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 GJB5O95377 273 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 GYPCP04921 128 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 UCHL3P15374 230 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 ATICP31939 592 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 RPL9P32969 192 aaKnown RBP11.05□□□□□ -0.64
RAB5C-207ENST00000550504 PBX3P40426 434 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 SLC11A1P49279 550 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 TAF6P49848 677 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 POLR2FP61218 127 aaKnown RBP11.05□□□□□ -0.64
RAB5C-207ENST00000550504 GOLGA8FQ08AF8 430 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 GOLGA8DPQ0D2H9 430 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 UPP1Q16831 310 aa11.05□□□□□ -0.64
RAB5C-207ENST00000550504 ARHGAP44Q17R89 818 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms