RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 RBM41Q96IZ5 413 aaKnown RBP9.53□□□□□ -0.88
TMEM116-209ENST00000550020 SPATA33Q96N06 139 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 GPR20Q99678 358 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 PI4K2AQ9BTU6 479 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 NFKBIZQ9BYH8 718 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 CENPHQ9H3R5 247 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 ELP3Q9H9T3 547 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 A0A0G2JMZ2 1700 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 CNTNAP2Q9UHC6 1331 aa9.53□□□□□ -0.88
TMEM116-209ENST00000550020 ARID2Q68CP9 1835 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 IGKV6-21A0A0C4DH24 114 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ACKR2O00590 384 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 SORBS3O60504 671 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 MSCO60682 206 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 VNN1O95497 513 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ASS1P00966 412 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TMEM191BP0C7N4 346 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 RARGP13631 454 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 P4HA1P13674 534 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 RRM1P23921 792 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 MDH1P40925 334 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PLTPP55058 493 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 NOMO3P69849 1222 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 SNAPC2Q13487 334 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PIGHQ14442 188 aaPredicted RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 KRT71Q3SY84 523 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PLEKHA7Q6IQ23 1121 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TSHZ1Q6ZSZ6 1077 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 RCOR2Q8IZ40 523 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 CCDC89Q8N998 374 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 RNF149Q8NC42 400 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ATL2Q8NHH9 583 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 EXD1Q8NHP7 514 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 FEZF2Q8TBJ5 459 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 C18orf8Q96DM3 657 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PGM2Q96G03 612 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 SNF8Q96H20 258 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PCYT2Q99447 389 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TRIM51Q9BSJ1 452 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TXLNGYQ9BZA5 131 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 CELF4Q9BZC1 486 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ROPN1BQ9BZX4 212 aaPredicted RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TRIM31Q9BZY9 425 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 MIS12Q9H081 205 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PLEKHA4Q9H4M7 779 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ROPN1Q9HAT0 212 aaPredicted RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ZDHHC18Q9NUE0 388 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 PRMT7Q9NVM4 692 aaPredicted RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 DDX56Q9NY93 547 aaKnown RBP9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ERAP1Q9NZ08 941 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 RSPH14Q9UHP6 348 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 GGA2Q9UJY4 613 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 TNFSF13BQ9Y275 285 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 ATP8A1Q9Y2Q0 1164 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 SNX24Q9Y343 169 aa9.52□□□□□ -0.89
TMEM116-209ENST00000550020 COL1A2P08123 1366 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 EP400Q96L91 3159 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 DNAJC25-GNG10A0A024R161 153 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 H0YGN5 161 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ATMINO43313 823 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 B4GALT4O60513 344 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 DDNO94850 711 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 KIAA0754O94854 1291 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 AGTP01019 485 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 SRGAP2CP0DJJ0 459 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 RARAP10276 462 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ATF2P15336 505 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 TMOD1P28289 359 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ATICP31939 592 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF132P52740 706 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 PTK6Q13882 451 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 PLCB4Q15147 1175 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CCNG2Q16589 344 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF699Q32M78 642 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 KCTD16Q68DU8 428 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF365Q70YC5 407 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 TAOK1Q7L7X3 1001 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ADAT2Q7Z6V5 191 aaKnown RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CCDC50Q8IVM0 306 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 NLGN2Q8NFZ4 835 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CPA5Q8WXQ8 436 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ART4Q93070 314 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CYFIP2Q96F07 1278 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CDCA5Q96FF9 252 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CCDC77Q9BR77 488 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 FRMD8P1Q9BZ68 369 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms