RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 CASD1Q96PB1 797 aa12.12□□□□□ -0.47
SCRN3-212ENST00000548868 IMPG2Q9BZV3 1241 aa12.12□□□□□ -0.47
SCRN3-212ENST00000548868 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
SCRN3-212ENST00000548868 SIX4Q9UIU6 781 aa12.12□□□□□ -0.47
SCRN3-212ENST00000548868 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
SCRN3-212ENST00000548868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.12□□□□□ -0.476e-6■□□□□ 9.8
SCRN3-212ENST00000548868 ANO9A1A5B4 782 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 ZBBXA8MT70 800 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 UPP2O95045 317 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 CST3P01034 146 aaPredicted RBP12.11□□□□□ -0.47
SCRN3-212ENST00000548868 POMCP01189 267 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 KRT19P08727 400 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 SLC9A1P19634 815 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 RFX1P22670 979 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 PNPLA4P41247 253 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
SCRN3-212ENST00000548868 DEFB103AP81534 67 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 LRRC52Q8N7C0 313 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 NEK11Q8NG66 645 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 PHOSPHO2Q8TCD6 241 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SCRN3-212ENST00000548868 FAM84AQ96KN4 292 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 FAM193BQ96PV7 902 aaPredicted RBP12.11□□□□□ -0.47
SCRN3-212ENST00000548868 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
SCRN3-212ENST00000548868 EDEM3Q9BZQ6 932 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 TBC1D13Q9NVG8 400 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 FBXL5Q9UKA1 691 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 COL4A6Q14031 1691 aa12.11□□□□□ -0.47
SCRN3-212ENST00000548868 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 TBKBP1A7MCY6 615 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 PIRO00625 290 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 UQCRHP07919 91 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 TRIM21P19474 475 aaKnown RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 PAX3P23760 479 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 POLR2BP30876 1174 aaKnown RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 RGS19P49795 217 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 MYL6P60660 151 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 RNASELQ05823 741 aaKnown RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 SOX4Q06945 474 aaPredicted RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 DSC1Q08554 894 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 KLHDC7AQ5VTJ3 777 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 DRC7Q8IY82 874 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 LRRC43Q8N309 656 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
SCRN3-212ENST00000548868 SIX2Q9NPC8 291 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 KIAA1671Q9BY89 1806 aa12.1□□□□□ -0.47
SCRN3-212ENST00000548868 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 TPM1P09493 284 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 MAGEA10P43363 369 aaPredicted RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 KLK7P49862 253 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 NOP14P78316 857 aaKnown RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 HPDLQ96IR7 371 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 TMEM175Q9BSA9 504 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 XYLT2Q9H1B5 865 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GANQ9H2C0 597 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 RC3H2Q9HBD1 1191 aaKnown RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 CEP72Q9P209 647 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 PODXLO00592 558 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 NOL4O94818 638 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GJB5O95377 273 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 P4HA1P13674 534 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 UCHL3P15374 230 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 TBXAS1P24557 533 aaPredicted RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 TAF6P49848 677 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GATMP50440 423 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 GCNT1Q02742 428 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
SCRN3-212ENST00000548868 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 UPP1Q16831 310 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 SV2CQ496J9 727 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 ZNF667Q5HYK9 610 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
SCRN3-212ENST00000548868 PI4K2AQ9BTU6 479 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms