RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 ROR1Q01973 937 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 PPM1LQ5SGD2 360 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 SLC8B1Q6J4K2 584 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 BMP8AQ7Z5Y6 402 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 GLIS3Q8NEA6 775 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 HPS3Q969F9 1004 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 CHAMP1Q96JM3 812 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 TNMDQ9H2S6 317 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 KBTBD4Q9NVX7 518 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 AGO2Q9UKV8 859 aaKnown RBP25.12■■□□□ 1.61
CACNB3-208ENST00000548279 PCDHA7Q9UN72 937 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 HCN4Q9Y3Q4 1203 aa25.12■■□□□ 1.61
CACNB3-208ENST00000548279 WDR27A2RRH5 827 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 GBP2P32456 591 aaPredicted RBP25.11■■□□□ 1.61
CACNB3-208ENST00000548279 MTMR3Q13615 1198 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 SPATA1Q5VX52 437 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 GRASPQ7Z6J2 395 aaPredicted RBP25.11■■□□□ 1.61
CACNB3-208ENST00000548279 PBXIP1Q96AQ6 731 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 ACCSQ96QU6 501 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 FBXL5Q9UKA1 691 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 ZDHHC9Q9Y397 364 aa25.11■■□□□ 1.61
CACNB3-208ENST00000548279 ZNF318Q5VUA4 2279 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 PDGFBP01127 241 aaPredicted RBP25.1■■□□□ 1.61
CACNB3-208ENST00000548279 HNRNPA1P09651 372 aaKnown RBP eCLIP25.1■■□□□ 1.61
CACNB3-208ENST00000548279 HOXA9P31269 272 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 AARSP49588 968 aaKnown RBP eCLIP25.1■■□□□ 1.61
CACNB3-208ENST00000548279 WNT7BP56706 349 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 SLFN12LQ6IEE8 588 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 GET4Q7L5D6 327 aaPredicted RBP25.1■■□□□ 1.61
CACNB3-208ENST00000548279 KCNG4Q8TDN1 519 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 POMGNT1Q8WZA1 660 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 TRIM9Q9C026 710 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 PCDHB8Q9UN66 801 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 TIMM13Q9Y5L4 95 aaPredicted RBP25.1■■□□□ 1.61
CACNB3-208ENST00000548279 NOTCH4Q99466 2003 aa25.1■■□□□ 1.61
CACNB3-208ENST00000548279 M0QZQ0 153 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 PRPF6O94906 941 aaKnown RBP25.09■■□□□ 1.61
CACNB3-208ENST00000548279 ABLIM3O94929 683 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 ARPP19P56211 112 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 CTXN3Q4LDR2 81 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 RSAD2Q8WXG1 361 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 KCNK12Q9HB15 430 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 HCFC1R1Q9NWW0 138 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 TSC2P49815 1807 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 KMT2EQ8IZD2 1858 aa25.09■■□□□ 1.61
CACNB3-208ENST00000548279 XPOTO43592 962 aaKnown RBP25.08■■□□□ 1.61
CACNB3-208ENST00000548279 CASP1P29466 404 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 ME1P48163 572 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 TMEM132DQ14C87 1099 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 CD302Q8IX05 232 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 CCDC65Q8IXS2 484 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 EFCAB13Q8IY85 973 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 BEST2Q8NFU1 509 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 ZNF461Q8TAF7 563 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 SAAL1Q96ER3 474 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 TSPAN18Q96SJ8 248 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 CUEDC2Q9H467 287 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 ASB7Q9H672 318 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 EPS15L1Q9UBC2 864 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 EXOC7Q9UPT5 735 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 PCDHB13Q9Y5F0 798 aa25.08■■□□□ 1.61
CACNB3-208ENST00000548279 SCN1AP35498 2009 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 H7C4K7 107 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 SPTLC1O15269 473 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 POLR2DO15514 142 aaKnown RBP25.07■■□□□ 1.6
CACNB3-208ENST00000548279 SEC24AO95486 1093 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 UVSSAQ2YD98 709 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 C9orf57Q5W0N0 161 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 RESP18Q5W5W9 173 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 ATL3Q6DD88 541 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 ZNF280DQ6N043 979 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 UBALD2Q8IYN6 164 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 IQUBQ8NA54 791 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 APPL2Q8NEU8 664 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 ST13P5Q8NFI4 369 aaPredicted RBP25.07■■□□□ 1.6
CACNB3-208ENST00000548279 CBWD1Q9BRT8 395 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 DNMT3BQ9UBC3 853 aaKnown RBP25.07■■□□□ 1.6
CACNB3-208ENST00000548279 RCOR1Q9UKL0 485 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 POLIQ9UNA4 740 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 DERAQ9Y315 318 aa25.07■■□□□ 1.6
CACNB3-208ENST00000548279 ANO9A1A5B4 782 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 POU2F2P09086 479 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 FSHRP23945 695 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 ALCAMQ13740 583 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 POSTNQ15063 836 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 FBXL6Q8N531 539 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 MFSD14AQ96MC6 490 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 FAM213AQ9BRX8 229 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 C2CD2Q9Y426 696 aa25.06■■□□□ 1.6
CACNB3-208ENST00000548279 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.06■■□□□ 1.6
CACNB3-208ENST00000548279 PIRO00625 290 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 LAMP2P13473 410 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 ATF2P15336 505 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 HOXD13P35453 343 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 LILRA4P59901 499 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 ASIC1P78348 528 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 TDGQ13569 410 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 CNNM4Q6P4Q7 775 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 ITFG1Q8TB96 612 aa25.05■■□□□ 1.6
CACNB3-208ENST00000548279 FAM84AQ96KN4 292 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms