RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 UROC1Q96N76 676 aa14.84□□□□□ -0.03
CCDC59-202ENST00000547758 PPP1R10Q96QC0 940 aaKnown RBP14.84□□□□□ -0.03
CCDC59-202ENST00000547758 GDAQ9Y2T3 454 aa14.84□□□□□ -0.03
CCDC59-202ENST00000547758 K7ESF4 209 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 ZNF263O14978 683 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 PRKCBP05771 671 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 ATF2P15336 505 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 BRCC3P46736 316 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 LRRC32Q14392 662 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 MAPK6Q16659 721 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 UPP1Q16831 310 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 AASDHQ4L235 1098 aaPredicted RBP14.83□□□□□ -0.04
CCDC59-202ENST00000547758 CYP4A22Q5TCH4 519 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 HEATR6Q6AI08 1181 aaKnown RBP14.83□□□□□ -0.04
CCDC59-202ENST00000547758 SKAP1Q86WV1 359 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 TCEAL8Q8IYN2 117 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 FAM160A2Q8N612 972 aaPredicted RBP14.83□□□□□ -0.04
CCDC59-202ENST00000547758 C3orf58Q8NDZ4 430 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 OXER1Q8TDS5 423 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 ZSWIM3Q96MP5 696 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 C2orf40Q9H1Z8 148 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 CYP4F11Q9HBI6 524 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 GOLGA2P5Q9HBQ8 144 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 PCDHA12Q9UN75 941 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 INSL5Q9Y5Q6 135 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 LAMA1P25391 3075 aa14.83□□□□□ -0.04
CCDC59-202ENST00000547758 ZFYVE26Q68DK2 2539 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 A0A087WWV3 80 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 ARNTLO00327 626 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 SEC24AO95486 1093 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 VIPR2P41587 438 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 MLLT6P55198 1093 aaPredicted RBP14.82□□□□□ -0.04
CCDC59-202ENST00000547758 ARPP19P56211 112 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 DCAF4L1Q3SXM0 396 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 EARS2Q5JPH6 523 aaKnown RBP14.82□□□□□ -0.04
CCDC59-202ENST00000547758 EEF1DP3Q658K8 133 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 CEP68Q76N32 757 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 MFSD6LQ8IWD5 586 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 ELMOD1Q8N336 334 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 MCPH1Q8NEM0 835 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 ZNF274Q96GC6 653 aaPredicted RBP14.82□□□□□ -0.04
CCDC59-202ENST00000547758 MSANTD3Q96H12 275 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 MFRPQ9BY79 579 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 TRPV4Q9HBA0 871 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 RBM12Q9NTZ6 932 aaKnown RBP14.82□□□□□ -0.04
CCDC59-202ENST00000547758 USP20Q9Y2K6 914 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 NCANO14594 1321 aa14.82□□□□□ -0.04
CCDC59-202ENST00000547758 IGF2RP11717 2491 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 ACKR2O00590 384 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 MOSPD3O75425 235 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 EDN1P05305 212 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC59-202ENST00000547758 XBP1P17861 261 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 LIG1P18858 919 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 STK3Q13188 491 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 SF3A2Q15428 464 aaKnown RBP14.81□□□□□ -0.04
CCDC59-202ENST00000547758 IQCEQ6IPM2 695 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 Q6ZS52 159 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 HS6ST3Q8IZP7 471 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 C12orf50Q8NA57 414 aaPredicted RBP14.81□□□□□ -0.04
CCDC59-202ENST00000547758 ZSCAN18Q8TBC5 510 aaPredicted RBP14.81□□□□□ -0.04
CCDC59-202ENST00000547758 CSGALNACT1Q8TDX6 532 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 BSNDQ8WZ55 320 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 CCDC113Q9H0I3 377 aa14.81□□□□□ -0.04
CCDC59-202ENST00000547758 TTC12Q9H892 705 aaPredicted RBP14.81□□□□□ -0.04
CCDC59-202ENST00000547758 HEPACAM2A8MVW5 462 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 TM4SF5O14894 197 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 GJA1P17302 382 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 CALCRLQ16602 461 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 WDR44Q5JSH3 913 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 TPGS2Q68CL5 300 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 LEMD2Q8NC56 503 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 ZNF512Q96ME7 567 aaPredicted RBP14.8□□□□□ -0.04
CCDC59-202ENST00000547758 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
CCDC59-202ENST00000547758 C8orf33Q9H7E9 229 aaPredicted RBP14.8□□□□□ -0.04
CCDC59-202ENST00000547758 ASAH2Q9NR71 780 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 GJB4Q9NTQ9 266 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 ZZEF1O43149 2961 aa14.8□□□□□ -0.04
CCDC59-202ENST00000547758 ZNF638Q14966 1978 aaKnown RBP14.8□□□□□ -0.04
CCDC59-202ENST00000547758 FASNP49327 2511 aaKnown RBP14.8□□□□□ -0.04
CCDC59-202ENST00000547758 SPEGQ15772 3267 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 WDFY3Q8IZQ1 3526 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 SLC38A8A6NNN8 435 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 H7C4K7 107 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 SYN3O14994 580 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 AXIN1O15169 862 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 CDKL5O76039 1030 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 MYL4P12829 197 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 HOXA6P31267 233 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 NAMPTP43490 491 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 SOX9P48436 509 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 KPNA1P52294 538 aaPredicted RBP14.79□□□□□ -0.04
CCDC59-202ENST00000547758 EPHA5P54756 1037 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 SOX4Q06945 474 aaPredicted RBP14.79□□□□□ -0.04
CCDC59-202ENST00000547758 TWF1Q12792 350 aa14.79□□□□□ -0.04
CCDC59-202ENST00000547758 COL9A2Q14055 689 aaPredicted RBP14.79□□□□□ -0.04
CCDC59-202ENST00000547758 TEAD2Q15562 447 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms