RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 VARS2Q5ST30 1063 aaKnown RBP16.04■□□□□ 0.16
CCDC38-205ENST00000546947 JADE1Q6IE81 842 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
CCDC38-205ENST00000546947 SPATA31D4Q6ZUB0 917 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 USP25Q9UHP3 1055 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 C2CD2Q9Y426 696 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 PVALEFA0A1B0GWK0 134 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 KIAA0391O15091 583 aaKnown RBP16.03■□□□□ 0.16
CCDC38-205ENST00000546947 ADAM12O43184 909 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 GPR37L1O60883 481 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 RFPL2O75678 378 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 ZMYND10O75800 440 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 IL18RAPO95256 599 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 PFKFB1P16118 471 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 OR1D2P34982 312 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 MRPL58Q14197 206 aaKnown RBP16.03■□□□□ 0.16
CCDC38-205ENST00000546947 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 LIN9Q5TKA1 542 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 CCDC149Q6ZUS6 474 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 NT5DC4Q86YG4 428 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 SERTAD1Q9UHV2 236 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 MUTYHQ9UIF7 546 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 PCDHB8Q9UN66 801 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 CDY1Q9Y6F8 540 aa16.03■□□□□ 0.16
CCDC38-205ENST00000546947 UBE4BO95155 1302 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 A0A1B0GVL5 298 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 C2CD4DB7Z1M9 353 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 M0QZQ0 153 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 NFICP08651 508 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 SP100P23497 879 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 HOXA9P31269 272 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 AFMP43652 599 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 EHHADHQ08426 723 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 UVSSAQ2YD98 709 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 TMEM31Q5JXX7 168 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 SLC8B1Q6J4K2 584 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ARMCX5Q6P1M9 558 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 RTL10Q7L3V2 364 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 EPM2AIP1Q7L775 607 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 TDRD5Q8NAT2 981 aaKnown RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ZNF507Q8TCN5 953 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 SMG7Q92540 1137 aaKnown RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ZNF707Q96C28 371 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 PRKD2Q9BZL6 878 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 BLZF1Q9H2G9 400 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.16
CCDC38-205ENST00000546947 HPSEQ9Y251 543 aa16.02■□□□□ 0.16
CCDC38-205ENST00000546947 SCN1AP35498 2009 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 FAM237AA0A1B0GTK4 181 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 EXTL3O43909 919 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 C8AP07357 584 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 HNRNPA1P09651 372 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC38-205ENST00000546947 GUCY2FP51841 1108 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 NUCB2P80303 420 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 CUL4BQ13620 913 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 PPM1LQ5SGD2 360 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 ZNF280DQ6N043 979 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 RSPO2Q6UXX9 243 aaPredicted RBP16.01■□□□□ 0.15
CCDC38-205ENST00000546947 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 BRSK2Q8IWQ3 736 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 TMEM130Q8N3G9 435 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 GLIS3Q8NEA6 775 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 SAAL1Q96ER3 474 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 CBWD1Q9BRT8 395 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 OXCT2Q9BYC2 517 aaPredicted RBP16.01■□□□□ 0.15
CCDC38-205ENST00000546947 PIDD1Q9HB75 910 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 TSC2P49815 1807 aa16.01■□□□□ 0.15
CCDC38-205ENST00000546947 CLUHO75153 1309 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 A0A1W2PQ27 194 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 A0A1W2PQ64 194 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 A0A1W2PQD8 194 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 ANO9A1A5B4 782 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 ARHGEF37A1IGU5 675 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 PIRO00625 290 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 MYL1P05976 194 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 POU2F2P09086 479 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 CASP1P29466 404 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 SYKP43405 635 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 LILRA4P59901 499 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
CCDC38-205ENST00000546947 ROR1Q01973 937 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
CCDC38-205ENST00000546947 PTPN21Q16825 1174 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 C9orf57Q5W0N0 161 aa16■□□□□ 0.15
CCDC38-205ENST00000546947 DSTYKQ6XUX3 929 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms