RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 JADE1Q6IE81 842 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 CRELD2Q6UXH1 353 aaPredicted RBP17.25■□□□□ 0.35
DDX54-204ENST00000546898 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
DDX54-204ENST00000546898 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX54-204ENST00000546898 FAM212AQ96EL1 285 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 A0A1W2PQ27 194 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 A0A1W2PQ64 194 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 A0A1W2PQD8 194 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 H7C4K7 107 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 DCXO43602 365 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 NFICP08651 508 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 COL9A1P20849 921 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 AFMP43652 599 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX54-204ENST00000546898 VARS2Q5ST30 1063 aaKnown RBP17.24■□□□□ 0.35
DDX54-204ENST00000546898 LIN9Q5TKA1 542 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 ARMCX5Q6P1M9 558 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 CCDC149Q6ZUS6 474 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 RNF135Q8IUD6 432 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 BRSK2Q8IWQ3 736 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 ZNF507Q8TCN5 953 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 USTQ9Y2C2 406 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 CDY1Q9Y6F8 540 aa17.24■□□□□ 0.35
DDX54-204ENST00000546898 CCDC195A0A1B0GUA6 201 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 M0QZQ0 153 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 EXTL3O43909 919 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 ZMYND10O75800 440 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 WEE2P0C1S8 567 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 OR1D2P34982 312 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 SYKP43405 635 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 CUL4BQ13620 913 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 MRPL58Q14197 206 aaKnown RBP17.23■□□□□ 0.35
DDX54-204ENST00000546898 SLC8B1Q6J4K2 584 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 ZNF280DQ6N043 979 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 RTL10Q7L3V2 364 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 GLIS3Q8NEA6 775 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 CBWD1Q9BRT8 395 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 FAM213AQ9BRX8 229 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 DOCK8Q8NF50 2099 aa17.23■□□□□ 0.35
DDX54-204ENST00000546898 ADAM12O43184 909 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 RFPL2O75678 378 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 HNRNPA1P09651 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX54-204ENST00000546898 CASP1P29466 404 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 HOXA9P31269 272 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 SNRPFP62306 86 aaKnown RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 C9orf57Q5W0N0 161 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 TDRD5Q8NAT2 981 aaKnown RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 ZNF707Q96C28 371 aaPredicted RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 PAGE5Q96GU1 130 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 OXCT2Q9BYC2 517 aaPredicted RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 PRKD2Q9BZL6 878 aa17.22■□□□□ 0.35
DDX54-204ENST00000546898 RBAKQ9NYW8 714 aaPredicted RBP17.22■□□□□ 0.35
DDX54-204ENST00000546898 MYO10Q9HD67 2058 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 PIRO00625 290 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 TBC1D4O60343 1298 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 C8AP07357 584 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 POU2F2P09086 479 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 NDUFA8P51970 172 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 ROR1Q01973 937 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 UVSSAQ2YD98 709 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 RSPO2Q6UXX9 243 aaPredicted RBP17.21■□□□□ 0.35
DDX54-204ENST00000546898 EFCAB13Q8IY85 973 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 CGNQ9P2M7 1197 aaKnown RBP17.21■□□□□ 0.35
DDX54-204ENST00000546898 MUTYHQ9UIF7 546 aa17.21■□□□□ 0.35
DDX54-204ENST00000546898 CLUHO75153 1309 aa17.21■□□□□ 0.34
DDX54-204ENST00000546898 DOCK6Q96HP0 2047 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
DDX54-204ENST00000546898 C2CD4DB7Z1M9 353 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 PPEF2O14830 753 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 KLRC4O43908 158 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 TYMPP19971 482 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 HOXD13P35453 343 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 LILRA4P59901 499 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 YWHAHQ04917 246 aaPredicted RBP17.2■□□□□ 0.34
DDX54-204ENST00000546898 PSMD2Q13200 908 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 CTXN3Q4LDR2 81 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 PPM1LQ5SGD2 360 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms