RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MEI1Q5TIA1 1274 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 DCAF4Q8WV16 495 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 FAR2Q96K12 515 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 C9orf72Q96LT7 481 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 POLE3Q9NRF9 147 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 HAO1Q9UJM8 370 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 JAG2Q9Y219 1238 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 EIF3DO15371 548 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 PRKAB2O43741 272 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ATP6V1C1P21283 382 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 CNTFP26441 200 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 SIK1P57059 783 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 PTENP60484 403 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 PTK7Q13308 1070 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 B3GNT6Q6ZMB0 384 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 LRRC74BQ6ZQY2 392 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ARHGEF26Q96DR7 871 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 C11orf70Q9BRQ4 267 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 SLC13A1Q9BZW2 595 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 GOLGA8JA6NMD2 632 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 PSMD3O43242 534 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 AKAP10O43572 662 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 GRK2P25098 689 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 KCNQ4P56696 695 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 BTBD10Q9BSF8 475 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 EYA4O95677 639 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 KCNMA1Q12791 1236 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 XRCC4Q13426 336 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 TTLL12Q14166 644 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 NCLNQ969V3 563 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 COPG2Q9UBF2 871 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ZBTB5O15062 677 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 CAND2O75155 1236 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ITGA8P53708 1063 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-212ENST00000546744 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF280CQ8ND82 737 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 CEP170P1Q96L14 293 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ZSWIM1Q9BR11 485 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 AS3MTQ9HBK9 375 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ATXN10Q9UBB4 475 aa13.43□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF609O15014 1411 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ALBP02768 609 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 OATP04181 439 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 BMP3P12645 472 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 GCLCP48506 637 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ACTR2P61160 394 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 SLC45A4Q5BKX6 768 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTCH1-212ENST00000546744 PPIL6Q8IXY8 311 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 IGDCC4Q8TDY8 1250 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 NAT9Q9BTE0 207 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 CAAP1Q9H8G2 361 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 TUFT1Q9NNX1 390 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 GIMAP4Q9NUV9 329 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 WDR47O94967 919 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 PRELPP51888 382 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
PTCH1-212ENST00000546744 NDUFA5Q16718 116 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 Q4G0T1 1027 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 NACA2Q9H009 215 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 FAM153AQ9UHL3 310 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 RABGEF1Q9UJ41 708 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 CAPN6Q9Y6Q1 641 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 XDHP47989 1333 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 CCDC78A2IDD5 438 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 POTEMA6NI47 508 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 FCER1AP12319 257 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 GCLMP48507 274 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 FMO5P49326 533 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 PRAMEP78395 509 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 MEA1Q16626 185 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 LRRC36Q1X8D7 754 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ABCB5Q2M3G0 1257 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 PARP6Q2NL67 630 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 LRRC6Q86X45 466 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 STMN3Q9NZ72 180 aa13.42□□□□□ -0.26
PTCH1-212ENST00000546744 ZC3H7BQ9UGR2 993 aaKnown RBP13.42□□□□□ -0.26
PTCH1-212ENST00000546744 C21orf2O43822 256 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms