RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPPL3-209ENST00000545209 CPA4Q9UI42 421 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 NAGPAQ9UK23 515 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 AJAP1Q9UKB5 411 aaPredicted RBP7.58□□□□□ -1.2
SPPL3-209ENST00000545209 TFR2Q9UP52 801 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 COQ4Q9Y3A0 265 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 SAR1BQ9Y6B6 198 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 V9GYY5 206 aaPredicted RBP7.58□□□□□ -1.2
SPPL3-209ENST00000545209 MCM3APO60318 1980 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 PLXNA1Q9UIW2 1896 aa7.58□□□□□ -1.2
SPPL3-209ENST00000545209 ADGRA2Q96PE1 1338 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 A0A0A6YYK5 440 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 INO80B-WBP1J3KQ70 363 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 OGTO15294 1046 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PHACTR2O75167 634 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 C22orf31O95567 290 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 SNAI1O95863 264 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 ATP1A1P05023 1023 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 INSRRP14616 1297 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TCP1P17987 556 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TNNI1P19237 187 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 USP8P40818 1118 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 ACOT2P49753 483 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 NLRP11P59045 1033 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 IGBP1P78318 339 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 CLDN10P78369 228 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 RBM10P98175 930 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 AMPD2Q01433 879 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 POU5F1BQ06416 359 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PPFIA1Q13136 1202 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 GRM1Q13255 1194 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 BIRC3Q13489 604 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PRPF4BQ13523 1007 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 DGKDQ16760 1214 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 ERCC6LQ2NKX8 1250 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 EFCAB12Q6NXP0 572 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 SV2AQ7L0J3 742 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 ARHGEF19Q8IW93 802 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PDCL2Q8N4E4 241 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TAS1R2Q8TE23 839 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 SOCS4Q8WXH5 440 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 CTNNBL1Q8WYA6 563 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 RABGGTAQ92696 567 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 NLRP4Q96MN2 994 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 IMPG2Q9BZV3 1241 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 INO80BQ9C086 356 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 KATNBL1Q9H079 304 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 ZFYVE28Q9HCC9 887 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TOPORSQ9NS56 1045 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 PRMT7Q9NVM4 692 aaPredicted RBP7.57□□□□□ -1.2
SPPL3-209ENST00000545209 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 CAPN6Q9Y6Q1 641 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 DUSP10Q9Y6W6 482 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 SIP14410 1827 aa7.57□□□□□ -1.2
SPPL3-209ENST00000545209 TRPM7Q96QT4 1865 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 RRN3P2A6NIE6 340 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 H3BRB1 525 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 FOXN3O00409 490 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ACKR2O00590 384 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ENC1O14682 589 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ZEB2O60315 1214 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 MSCO60682 206 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 CLSTN1O94985 981 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 HLA-DRAP01903 254 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 TUBBP07437 444 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 MMP3P08254 477 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 HOXC6P09630 235 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ZNF286BP0CG31 522 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PRLRP16471 622 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 KLRC1P26715 233 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 RGS2P41220 211 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 NOP2P46087 812 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PDE6CP51160 858 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 CLCN3P51790 818 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 BPIFB4P59827 614 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PTENP60484 403 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 GCNT1Q02742 428 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 TNFAIP2Q03169 654 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 MCL1Q07820 350 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 DRP2Q13474 957 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 KYAT1Q16773 422 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ZNF568Q3ZCX4 644 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ZACNQ401N2 412 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 GJC2Q5T442 439 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 CCDC181Q5TID7 509 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ATF7IP2Q5U623 682 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 CCDC70Q6NSX1 233 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms