RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 PIAS3Q9Y6X2 628 aa19.54■□□□□ 0.72
CLSTN3-214ENST00000542663 ZFHX4Q86UP3 3567 aa19.54■□□□□ 0.72
CLSTN3-214ENST00000542663 K7ERI5 159 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 ARNTLO00327 626 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 GJA1P17302 382 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 VIPR2P41587 438 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 YARSP54577 528 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 EPHA5P54756 1037 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 SATB1Q01826 763 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 TPGS2Q68CL5 300 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 CELF5Q8N6W0 485 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 ERMNQ8TAM6 284 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 KIFAP3Q92845 792 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 CCDC94Q9BW85 323 aaPredicted RBP19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 BHMT2Q9H2M3 363 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 TOPORSQ9NS56 1045 aaPredicted RBP19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
CLSTN3-214ENST00000542663 PHLPP2Q6ZVD8 1323 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 H7C4K7 107 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 ABLIM1O14639 778 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 ADRB1P08588 477 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 OR52Z1P0C646 297 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 CHRNB1P11230 501 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 KCNE1P15382 129 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 MUTP22033 750 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 CCR3P51677 355 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 ST3GAL1Q11201 340 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 ZNF568Q3ZCX4 644 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 WDR44Q5JSH3 913 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 TRPV4Q9HBA0 871 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 CNTN3Q9P232 1028 aa19.52■□□□□ 0.72
CLSTN3-214ENST00000542663 OBSL1O75147 1896 aa19.52■□□□□ 0.71
CLSTN3-214ENST00000542663 ZNF638Q14966 1978 aaKnown RBP19.52■□□□□ 0.71
CLSTN3-214ENST00000542663 PROZP22891 400 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 NPTX2P47972 431 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 DMWDQ09019 674 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 TWF1Q12792 350 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 TRIM29Q14134 588 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 ZNF174Q15697 407 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 CTXN3Q4LDR2 81 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 CYP4A22Q5TCH4 519 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 MFSD6LQ8IWD5 586 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 DAW1Q8N136 415 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 ZSCAN18Q8TBC5 510 aaPredicted RBP19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 DEPDC1BQ8WUY9 529 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 RSPRY1Q96DX4 576 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 SUSD3Q96L08 255 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 AFF4Q9UHB7 1163 aaKnown RBP19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 RAB23Q9ULC3 237 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 CHD8Q9HCK8 2581 aa19.51■□□□□ 0.71
CLSTN3-214ENST00000542663 ATG2BQ96BY7 2078 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 SLC30A4O14863 429 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 VNN2O95498 520 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 RETP07949 1114 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 MYL4P12829 197 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 CCNE1P24864 410 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 RPL9P32969 192 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 CCT6AP40227 531 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 PEX3P56589 373 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 ANAPC15P60006 121 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 GUCY1B3Q02153 619 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 PPP2R5DQ14738 602 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 TEAD2Q15562 447 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 RNF19BQ6ZMZ0 732 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 PRR23BQ6ZRT6 265 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 ELMOD1Q8N336 334 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 TMEM130Q8N3G9 435 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 NETO1Q8TDF5 533 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 DDX12PQ92771 950 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 ZNF512Q96ME7 567 aaPredicted RBP19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 ACAP3Q96P50 834 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 TARS2Q9BW92 718 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 TMEM134Q9H6X4 195 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 ARHGAP28Q9P2N2 729 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 NUB1Q9Y5A7 615 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 TCHHQ07283 1943 aa19.5■□□□□ 0.71
CLSTN3-214ENST00000542663 USP24Q9UPU5 2620 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 CFAP47Q6ZTR5 3102 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 CCDC169A6NNP5 214 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 ZNF263O14978 683 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 HRO43593 1189 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 LRP3O75074 770 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 MCF2P10911 925 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 CXCL12P48061 93 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 SRSF5Q13243 272 aaKnown RBP19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 PTGDRQ13258 359 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 ORC2Q13416 577 aaPredicted RBP19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 HAUS3Q68CZ6 603 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 IQCEQ6IPM2 695 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 ZNF280DQ6N043 979 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 C4orf32Q8N8J7 132 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 SHKBP1Q8TBC3 707 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 TBC1D32Q96NH3 1257 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 LRRC3Q9BY71 257 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 MRPL4Q9BYD3 311 aaKnown RBP19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 ASAH2Q9NR71 780 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 SEMA4GQ9NTN9 838 aa19.49■□□□□ 0.71
CLSTN3-214ENST00000542663 KIAA1024Q9UPX6 916 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms