RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 SP3Q02447 781 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 GLB1LQ6UWU2 654 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 CWC27Q6UX04 472 aaKnown RBP7.47□□□□□ -1.21
TTR-203ENST00000541025 TMEM179Q6ZVK1 233 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 CENPQQ7L2Z9 268 aaPredicted RBP7.47□□□□□ -1.21
TTR-203ENST00000541025 OTOP1Q7RTM1 612 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 CTU1Q7Z7A3 348 aaKnown RBP7.47□□□□□ -1.21
TTR-203ENST00000541025 LRRC47Q8N1G4 583 aaKnown RBP7.47□□□□□ -1.21
TTR-203ENST00000541025 CLEC4DQ8WXI8 215 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 LOXL4Q96JB6 756 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 FEZ1Q99689 392 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 NAPBQ9H115 298 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 ARHGEF4Q9NR80 690 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 CCDC171Q6TFL3 1326 aa7.47□□□□□ -1.21
TTR-203ENST00000541025 TRAV20A0A0B4J274 112 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 C19orf81C9J6K1 198 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 SLC27A2O14975 620 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 FGAP02671 866 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 GPR85P60893 370 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 LACTBP83111 547 aaPredicted RBP7.46□□□□□ -1.22
TTR-203ENST00000541025 PPARAQ07869 468 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 CPZQ66K79 652 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 AMOTL1Q8IY63 956 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 MBD6Q96DN6 1003 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 ABHD8Q96I13 439 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 C12orf42Q96LP6 360 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 ZSWIM3Q96MP5 696 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 PARK7Q99497 189 aaKnown RBP7.46□□□□□ -1.22
TTR-203ENST00000541025 SSBP3Q9BWW4 388 aaPredicted RBP7.46□□□□□ -1.22
TTR-203ENST00000541025 C1QTNF3Q9BXJ4 246 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 NACAP1Q9BZK3 213 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 KIAA1683Q9H0B3 1180 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
TTR-203ENST00000541025 FTSJ1Q9UET6 329 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 TRIM17Q9Y577 477 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 PLIN4Q96Q06 1357 aa7.46□□□□□ -1.22
TTR-203ENST00000541025 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 LCTP09848 1927 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 IGKV6D-41A0A0C4DH26 115 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 LAMTOR5O43504 91 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 B4GALT3O60512 393 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 EEF2P13639 858 aaKnown RBP7.45□□□□□ -1.22
TTR-203ENST00000541025 VCAM1P19320 739 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 HAND2P61296 217 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 ICA1Q05084 483 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 IFRD2Q12894 506 aaPredicted RBP7.45□□□□□ -1.22
TTR-203ENST00000541025 ALX1Q15699 326 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 KCNT2Q6UVM3 1135 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 TICAM2Q86XR7 235 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 KLHL36Q8N4N3 616 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
TTR-203ENST00000541025 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.45□□□□□ -1.22
TTR-203ENST00000541025 ERO1AQ96HE7 468 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 CCDC136Q96JN2 1154 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 CCDC17Q96LX7 622 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 P2RX7Q99572 595 aaKnown RBP7.45□□□□□ -1.22
TTR-203ENST00000541025 TXNRD2Q9NNW7 524 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 DIAPH3Q9NSV4 1193 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 SNTG2Q9NY99 539 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 TMOD4Q9NZQ9 345 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 ANAPC4Q9UJX5 808 aa7.45□□□□□ -1.22
TTR-203ENST00000541025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
TTR-203ENST00000541025 NMT2O60551 498 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 GNAT1P11488 350 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 GRK2P25098 689 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 CHMLP26374 656 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 HOXA7P31268 230 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 GRK3P35626 688 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 PSMC4P43686 418 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 HERVK_113P62684 666 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 NTRK3Q16288 839 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 MTERF2Q49AM1 385 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 VASNQ6EMK4 673 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 PKN3Q6P5Z2 889 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 TMC5Q6UXY8 1006 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 PROSER1Q86XN7 944 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 TBC1D10CQ8IV04 446 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 SPICE1Q8N0Z3 855 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 CHST13Q8NET6 341 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 SMCR8Q8TEV9 937 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 CEP95Q96GE4 821 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 DEPDC7Q96QD5 511 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 OSBPL2Q9H1P3 480 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 RPAP3Q9H6T3 665 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 BARX1Q9HBU1 254 aaPredicted RBP7.44□□□□□ -1.22
TTR-203ENST00000541025 DLL4Q9NR61 685 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 TMX2Q9Y320 296 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 ZMYM6O95789 1325 aa7.44□□□□□ -1.22
TTR-203ENST00000541025 MCM3APO60318 1980 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms