RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ANKRD20A1Q5TYW2 823 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ANKRD20A3Q5VUR7 823 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 MFSD14CQ5VZR4 134 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 NUGGCQ68CJ6 796 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 EP400NLQ6ZTU2 488 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ASRGL1Q7L266 308 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PLEKHH3Q7Z736 793 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 EXOC3L1Q86VI1 746 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SYT2Q8N9I0 419 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 C12orf50Q8NA57 414 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ZNF483Q8TF39 744 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 INPP5DQ92835 1189 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 HAS1Q92839 578 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SLCO2A1Q92959 643 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ARHGEF2Q92974 986 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SLC35C1Q96A29 364 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 TMEM237Q96Q45 408 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ZSWIM1Q9BR11 485 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SEMA4AQ9H3S1 761 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PRKAG3Q9UGI9 489 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 DNAJC12Q9UKB3 198 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 DNM3Q9UQ16 869 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 L3MBTL1Q9Y468 752 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 WDR87Q6ZQQ6 2873 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CYP3A7-CYP3A51PA0A087WV96 503 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 KLHL33A6NCF5 533 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 A6NHS1 94 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 MSCO60682 206 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 NPM3O75607 178 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 DCTN3O75935 186 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 MTA2O94776 668 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 SNUPNO95149 360 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 UNC5CO95185 931 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ECEL1O95672 775 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 KRT16P08779 473 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ACRP10323 421 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ITIH2P19823 946 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CYP3A7P24462 503 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 COILP38432 576 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 GIT2Q14161 759 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 RRP1BQ14684 758 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 DRAP1Q14919 205 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ECM1Q16610 540 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 PTPROQ16827 1216 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 TMEM240Q5SV17 173 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 RASIP1Q5U651 963 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 DCAF12L1Q5VU92 463 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CCDC137Q6PK04 289 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 SFR1Q86XK3 245 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CCDC105Q8IYK2 499 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 FAM186BQ8IYM0 893 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 PRELID2Q8N945 189 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 NPLOC4Q8TAT6 608 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 GRK7Q8WTQ7 553 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 TGFBRAP1Q8WUH2 860 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 HERVK_113Q902F9 699 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 GLG1Q92896 1179 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 NAF1Q96HR8 494 aaKnown RBP8.28□□□□□ -1.08
CPSF7-216ENST00000536548 MBOAT7Q96N66 472 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 AGPAT1Q99943 283 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 FOXP3Q9BZS1 431 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 LRMDAQ9H2I8 198 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 VCXQ9H320 206 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 KCNK9Q9NPC2 374 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 FGFR1OP2Q9NVK5 253 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ADAM22Q9P0K1 906 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CTTNBP2NLQ9P2B4 639 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 LGALS13Q9UHV8 139 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 STK38LQ9Y2H1 464 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 LRRC42Q9Y546 428 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 CFAP47Q6ZTR5 3102 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ADGRA3Q8IWK6 1321 aa8.28□□□□□ -1.08
CPSF7-216ENST00000536548 ZFHX2Q9C0A1 2572 aaPredicted RBP8.27□□□□□ -1.08
CPSF7-216ENST00000536548 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 ZNF318Q5VUA4 2279 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 NDC80O14777 642 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 MAPK13O15264 365 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 AKAP3O75969 853 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 NPTXRO95502 500 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 SNHG28P0DPA3 235 aa8.27□□□□□ -1.09
CPSF7-216ENST00000536548 CYBAP13498 195 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms