RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 TULP1O00294 542 aaPredicted RBP14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CITO14578 2027 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRKDC-206ENST00000536429 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 TRAPPC3O43617 180 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 OR1D2P34982 312 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CREMQ03060 361 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 STK4Q13043 487 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 KMT5BQ4FZB7 885 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 ARMCX5Q6P1M9 558 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 GPR149Q86SP6 731 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CD302Q8IX05 232 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 KIAA0895Q8NCT3 520 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 KREMEN2Q8NCW0 462 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 BEST2Q8NFU1 509 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
PRKDC-206ENST00000536429 ZNF707Q96C28 371 aaPredicted RBP14.28□□□□□ -0.12
PRKDC-206ENST00000536429 ASB7Q9H672 318 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 TIMM13Q9Y5L4 95 aaPredicted RBP14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
PRKDC-206ENST00000536429 CCDC195A0A1B0GUA6 201 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 SYN3O14994 580 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 EXTL3O43909 919 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 TBC1D4O60343 1298 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 AARSP49588 968 aaKnown RBP eCLIP14.27□□□□□ -0.13
PRKDC-206ENST00000536429 RAB33AQ14088 237 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 MRPL58Q14197 206 aaKnown RBP14.27□□□□□ -0.13
PRKDC-206ENST00000536429 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 KRBA2Q6ZNG9 492 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 CBWD2Q8IUF1 395 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 POP1Q99575 1024 aaKnown RBP14.27□□□□□ -0.13
PRKDC-206ENST00000536429 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 RBAKQ9NYW8 714 aaPredicted RBP14.27□□□□□ -0.13
PRKDC-206ENST00000536429 USP25Q9UHP3 1055 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 FBXW11Q9UKB1 542 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 DERAQ9Y315 318 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 C2CD2Q9Y426 696 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 BACE2Q9Y5Z0 518 aa14.27□□□□□ -0.13
PRKDC-206ENST00000536429 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 C2CD4DB7Z1M9 353 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 M0QZQ0 153 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PIRO00625 290 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 CLIC2O15247 247 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 XPOTO43592 962 aaKnown RBP14.26□□□□□ -0.13
PRKDC-206ENST00000536429 ZNF202O95125 648 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 MTHFRP42898 656 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 BMT2Q1RMZ1 405 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 ATAT1Q5SQI0 421 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 ANKS3Q6ZW76 656 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 STXBP4Q6ZWJ1 553 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 RNF135Q8IUD6 432 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 GPD1LQ8N335 351 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 CMASQ8NFW8 434 aaPredicted RBP14.26□□□□□ -0.13
PRKDC-206ENST00000536429 RIPOR3Q96MK2 946 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PLEKHA4Q9H4M7 779 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PDE11AQ9HCR9 933 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 EXOC1Q9NV70 894 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 DPP3Q9NY33 737 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 HSPBP1Q9NZL4 362 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 MUTYHQ9UIF7 546 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 FBXL5Q9UKA1 691 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PCDHB8Q9UN66 801 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 PLXNA3P51805 1871 aa14.26□□□□□ -0.13
PRKDC-206ENST00000536429 UBE4BO95155 1302 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 PTPRJQ12913 1337 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 PI4K2BG5E9Z4 385 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 ZMYND10O75800 440 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 IL18RAPO95256 599 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 PAPLNO95428 1278 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 C1RP00736 705 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 RPN1P04843 607 aaKnown RBP14.25□□□□□ -0.13
PRKDC-206ENST00000536429 ARPP19P56211 112 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 LILRA4P59901 499 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 TFAMQ00059 246 aaKnown RBP14.25□□□□□ -0.13
PRKDC-206ENST00000536429 POU5F1Q01860 360 aaKnown RBP14.25□□□□□ -0.13
PRKDC-206ENST00000536429 ROR1Q01973 937 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 DPYDQ12882 1025 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 SLC8B1Q6J4K2 584 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 C15orf39Q6ZRI6 1047 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 C1orf127Q8N9H9 656 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 HDAC7Q8WUI4 952 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 NECTIN4Q96NY8 510 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 TCHHQ07283 1943 aa14.25□□□□□ -0.13
PRKDC-206ENST00000536429 PDCD11Q14690 1871 aaKnown RBP14.25□□□□□ -0.13
PRKDC-206ENST00000536429 WDR27A2RRH5 827 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 FAM86C2PA6NEL3 165 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 LDHAP00338 332 aaKnown RBP14.24□□□□□ -0.13
PRKDC-206ENST00000536429 C8AP07357 584 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 OR4Q2P0C623 313 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 CYP2J2P51589 502 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
PRKDC-206ENST00000536429 CTXN3Q4LDR2 81 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms