RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 CYP4F11Q9HBI6 524 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 WRAP73Q9P2S5 460 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-206ENST00000535290 INVSQ9Y283 1065 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 INSL5Q9Y5Q6 135 aa9.19□□□□□ -0.94
CLIP1-206ENST00000535290 A0A1B0GUA9 196 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ESYT2A0FGR8 921 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 EML1O00423 815 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ASAP2O43150 1006 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 C1QL1O75973 258 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 B3GAT3O94766 335 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 THP07101 528 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ATF2P15336 505 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 GBP1P32455 592 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 EPHA5P54756 1037 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ARPP19P56211 112 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 C19orf57Q0VDD7 668 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 EMC2Q15006 297 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 RTN1Q16799 776 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 PFKFB3Q16875 520 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-206ENST00000535290 WDR81Q562E7 1941 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 STXBP5Q5T5C0 1151 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 IQCEQ6IPM2 695 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 SLC8B1Q6J4K2 584 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 FSTL4Q6MZW2 842 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 SLC27A1Q6PCB7 646 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 APOA5Q6Q788 366 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ANKS3Q6ZW76 656 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-206ENST00000535290 E2F7Q96AV8 911 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 TMEM209Q96SK2 561 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 SLITRK6Q9H5Y7 841 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 C6orf50Q9HD87 102 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 RBM28Q9NW13 759 aaKnown RBP9.18□□□□□ -0.94
CLIP1-206ENST00000535290 ZMYM2Q9UBW7 1377 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 RAXQ9Y2V3 346 aa9.18□□□□□ -0.94
CLIP1-206ENST00000535290 RBM8AQ9Y5S9 174 aaKnown RBP9.18□□□□□ -0.94
CLIP1-206ENST00000535290 VWA8A3KMH1 1905 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 CCDC194A0A1B0GVG4 234 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 H0Y626 953 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ZBTB39O15060 712 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ATG13O75143 517 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 TRIM16O95361 564 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 PRKCBP05771 671 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 CDC27P30260 824 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 RFC5P40937 340 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 MAPK8P45983 427 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 BRCC3P46736 316 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 USP11P51784 963 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 TWF1Q12792 350 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 PDAP1Q13442 181 aaKnown RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 TMEM196Q5HYL7 178 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 LARP1BQ659C4 914 aaKnown RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 PMS2CLQ68D20 193 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 SYNE3Q6ZMZ3 975 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 SMC5Q8IY18 1101 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 C3orf58Q8NDZ4 430 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 MDM1Q8TC05 714 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ASAP3Q8TDY4 903 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 TCP11Q8WWU5 503 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 CHFRQ96EP1 664 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 CRELD1Q96HD1 420 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ZNF512Q96ME7 567 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 CCDC86Q9H6F5 360 aaKnown RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 XPNPEP1Q9NQW7 623 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ASAH2Q9NR71 780 aa9.17□□□□□ -0.94
CLIP1-206ENST00000535290 TDRD15B5MCY1 1934 aaKnown RBP9.17□□□□□ -0.94
CLIP1-206ENST00000535290 ATG2BQ96BY7 2078 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 A0A1W2PRU2 124 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 TMEM189-UBE2V1I3L0A0 370 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 TBX3O15119 743 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 RNF40O75150 1001 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 RECQL4O94761 1208 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 TDP2O95551 362 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 EGFP01133 1207 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 PLA2G2AP14555 144 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 BCKDHBP21953 392 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 CHMLP26374 656 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 QARSP47897 775 aaKnown RBP9.16□□□□□ -0.94
CLIP1-206ENST00000535290 PSEN1P49768 467 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 CLCNKBP51801 687 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 NUCB1Q02818 461 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 GRSF1Q12849 480 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLIP1-206ENST00000535290 SEMA3BQ13214 749 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 CAPSQ13938 189 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 KARSQ15046 597 aaKnown RBP9.16□□□□□ -0.94
CLIP1-206ENST00000535290 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 Q4G0T1 1027 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 ARHGAP29Q52LW3 1261 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 LURAP1LQ8IV03 231 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 ELMOD1Q8N336 334 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 LEMD2Q8NC56 503 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 ETNPPLQ8TBG4 499 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 SLC39A7Q92504 469 aa9.16□□□□□ -0.94
CLIP1-206ENST00000535290 PIGKQ92643 395 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms