RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 HNRNPDLO14979 420 aaKnown RBP12.32□□□□□ -0.44
CLCF1-202ENST00000533438 PI15O43692 258 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 TRAK2O60296 914 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 FAM13AO94988 1023 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 CLTAP09496 248 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 ATF2P15336 505 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 LRPAP1P30533 357 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 GTF2BQ00403 316 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 RESTQ13127 1097 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 KYAT1Q16773 422 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 SLC39A4Q6P5W5 647 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 SIX5Q8N196 739 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 TMEM130Q8N3G9 435 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 MYCT1Q8N699 235 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 ITFG1Q8TB96 612 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 DDX12PQ92771 950 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 FGF13Q92913 245 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 FGF14Q92915 247 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 EPSTI1Q96J88 318 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 HCFC1R1Q9NWW0 138 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 FBXL5Q9UKA1 691 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 POLIQ9UNA4 740 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
CLCF1-202ENST00000533438 PTPRZ1P23471 2315 aaPredicted RBP12.32□□□□□ -0.44
CLCF1-202ENST00000533438 A0A0B4J269 797 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 H7C4K7 107 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 M0QZQ0 153 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 OGTO15294 1046 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 F13A1P00488 732 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 CYP3A5P20815 502 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 MCM4P33991 863 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 MATR3P43243 847 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 LIG4P49917 911 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 SPAG1Q07617 926 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 ENOX2Q16206 610 aaKnown RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 PABPC1LQ4VXU2 614 aaKnown RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 ZBTB41Q5SVQ8 909 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 PARM1Q6UWI2 310 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 MAP4K3Q8IVH8 894 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 TCEAL8Q8IYN2 117 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 GPR152Q8TDT2 470 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 ST6GALNAC4Q9H4F1 302 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 ZSCAN16Q9H4T2 348 aaPredicted RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 SLC2A4RGQ9NR83 387 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
CLCF1-202ENST00000533438 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.31□□□□□ -0.44
CLCF1-202ENST00000533438 LACTBL1A8MY62 500 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 SEC24AO95486 1093 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 KRT18P05783 430 aaKnown RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 RHOP08100 348 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 MARCKSP29966 332 aaPredicted RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 ABCD1P33897 745 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 SLC5A9Q2M3M2 681 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 CTXN3Q4LDR2 81 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 TPGS2Q68CL5 300 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 ZNF280DQ6N043 979 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 POTEHQ6S545 545 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 MTSS1LQ765P7 747 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 NPAS3Q8IXF0 933 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 APPL2Q8NEU8 664 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 ST13P5Q8NFI4 369 aaPredicted RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 STK17AQ9UEE5 414 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 STYXL1Q9Y6J8 313 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
CLCF1-202ENST00000533438 MIA3Q5JRA6 1907 aa12.3□□□□□ -0.44
CLCF1-202ENST00000533438 COL4A3Q01955 1670 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 TCHHQ07283 1943 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 GVINP1Q7Z2Y8 2422 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 SCN1AP35498 2009 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 ANKRD63C9JTQ0 380 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
CLCF1-202ENST00000533438 LRG1P02750 347 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 PTPN2P17706 415 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 ELF1P32519 619 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 ARPP19P56211 112 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 ZC2HC1CQ53FD0 456 aaPredicted RBP12.29□□□□□ -0.44
CLCF1-202ENST00000533438 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 SPATA1Q5VX52 437 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 PHLDB3Q6NSJ2 640 aa12.29□□□□□ -0.44
CLCF1-202ENST00000533438 CD302Q8IX05 232 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms