RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 DHX37Q8IY37 1157 aaKnown RBP1.98□□□□□ -2.09
KNL1-211ENST00000533001 IGSF22Q8N9C0 903 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 FANCBQ8NB91 859 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 EXOC6Q8TAG9 804 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 ADAMTS14Q8WXS8 1223 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 SEPT8Q92599 483 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 ZFYVE19Q96K21 471 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 NECTIN4Q96NY8 510 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 GAD1Q99259 594 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 POP1Q99575 1024 aaKnown RBP1.98□□□□□ -2.09
KNL1-211ENST00000533001 PHF20Q9BVI0 1012 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 RNF38Q9H0F5 515 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 XYLT2Q9H1B5 865 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 TLE6Q9H808 572 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 ZSCAN32Q9NX65 697 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 ARHGAP20Q9P2F6 1191 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 PILRBQ9UKJ0 227 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 CLEC4EQ9ULY5 219 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 PCDHA6Q9UN73 950 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 BTBD3Q9Y2F9 522 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 IPPQ9Y573 584 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 PCDHA8Q9Y5H6 950 aa1.98□□□□□ -2.09
KNL1-211ENST00000533001 FRMD3A2A2Y4 597 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 HHLA1C9JL84 531 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RETP07949 1114 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MYL3P08590 195 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ACO1P21399 889 aaKnown RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 KRT76Q01546 638 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PPP2R3AQ06190 1150 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SCRN1Q12765 414 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PPFIA1Q13136 1202 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 HYIQ5T013 277 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CDCP2Q5VXM1 449 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PLA2G4FQ68DD2 849 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 YME1L1Q96TA2 773 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ZSWIM1Q9BR11 485 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 NEU3Q9UQ49 428 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RAI2Q9Y5P3 530 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 IFNAR1P17181 557 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 GJA1P17302 382 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RXRAP19793 462 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 STAT5BP51692 787 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PAN2Q504Q3 1202 aaKnown RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 SLC44A4Q53GD3 710 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 GRASPQ7Z6J2 395 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 EFCAB13Q8IY85 973 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 HS6ST3Q8IZP7 471 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 IL17RCQ8NAC3 791 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 GLIS3Q8NEA6 775 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ZNF461Q8TAF7 563 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 HTR3CQ8WXA8 447 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PNMA5Q96PV4 448 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MED15Q96RN5 788 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 BLOC1S4Q9NUP1 217 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 NEUROG3Q9Y4Z2 214 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PCDHB2Q9Y5E7 798 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 USF3Q68DE3 2245 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CR1P17927 2039 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PCNX3Q9H6A9 2034 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 KIAA1549Q9HCM3 1950 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 FREM1Q5H8C1 2179 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CCDC195A0A1B0GUA6 201 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 A0A1W2PR77 199 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PIRO00625 290 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SNW1Q13573 536 aaKnown RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 IHHQ14623 411 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SAFBQ15424 915 aaKnown RBP eCLIP1.97□□□□□ -2.094e-6■■□□□ 12.7
KNL1-211ENST00000533001 ZC2HC1CQ53FD0 456 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 MOXD1Q6UVY6 613 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MFSD6LQ8IWD5 586 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ACOX2Q99424 681 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 FAM126AQ9BYI3 521 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 SFXN1Q9H9B4 322 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MAN1C1Q9NR34 630 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 OSER1Q9NX31 292 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SPG21Q9NZD8 308 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RGL1Q9NZL6 768 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 FBXL5Q9UKA1 691 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 A0A087X0B3 334 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MED24O75448 989 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ZNF821O75541 412 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 PIGRP01833 764 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CDC25AP30304 524 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RCAN1P53805 252 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CLDN10P78369 228 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 KCNA1Q09470 495 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 USP4Q13107 963 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 MLF2Q15773 248 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 ZNF77Q15935 545 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 STPG1Q5TH74 334 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 PDXDC1Q6P996 788 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SMARCC2Q8TAQ2 1214 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 USP13Q92995 863 aaPredicted RBP1.97□□□□□ -2.09
KNL1-211ENST00000533001 EVI5LQ96CN4 794 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 CAMK1GQ96NX5 476 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 RIT2Q99578 217 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 STARD13Q9Y3M8 1113 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 ALPK2Q86TB3 2170 aa1.97□□□□□ -2.09
KNL1-211ENST00000533001 SMIM28A0A1B0GU29 152 aa1.96□□□□□ -2.09
KNL1-211ENST00000533001 SLC27A2O14975 620 aa1.96□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms