RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ACAD10Q6JQN1 1059 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 LIN54Q6MZP7 749 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 GAREM2Q75VX8 874 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 TXNRD3Q86VQ6 643 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 UTP4Q969X6 686 aaKnown RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 TP53INP1Q96A56 240 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 LENG1Q96BZ8 264 aaPredicted RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 RRP36Q96EU6 259 aaKnown RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 MAP6Q96JE9 813 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 CDHR1Q96JP9 859 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 PPP1R9BQ96SB3 815 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 AGXT2Q9BYV1 514 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 HAPLN2Q9GZV7 340 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 ADAM7Q9H2U9 754 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 MRPL46Q9H2W6 279 aaKnown RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 GIMAP2Q9UG22 337 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 VPS28Q9UK41 221 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 TBX20Q9UMR3 447 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 RWDD3Q9Y3V2 267 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 MAGED1Q9Y5V3 778 aaPredicted RBP4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 SNX11Q9Y5W9 270 aa4.9□□□□□ -1.63
AC055878.1-201ENST00000531858 TCRBV5S2A0A599 114 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 AQP12BA6NM10 295 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 BTN3A1O00481 513 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NFIBO00712 420 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 URI1O94763 535 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 MPIG6BO95866 241 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 A1BGP04217 495 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 TGFB3P10600 412 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 AKR1B1P15121 316 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 FUT4P22083 530 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PTGS1P23219 599 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 KLRC1P26715 233 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 GABRB3P28472 473 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PRDX5P30044 214 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ECHS1P30084 290 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 AARSP49588 968 aaKnown RBP eCLIP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 CARSP49589 748 aaKnown RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 FLT3LGP49771 235 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 RGS3P49796 1198 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF200P98182 395 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PLIN5Q00G26 463 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 EGR3Q06889 387 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 TARDBPQ13148 414 aaKnown RBP eCLIP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 KRT32Q14532 448 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NOLC1Q14978 699 aaKnown RBP eCLIP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 DLGAP5Q15398 846 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 MAPKAPK3Q16644 382 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF827Q17R98 1081 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NKPD1Q17RQ9 610 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 VWA3BQ502W6 1294 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ZAR1Q86SH2 424 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 FAM90A1Q86YD7 464 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 CLEC10AQ8IUN9 316 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NRSN1Q8IZ57 195 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 OR6Y1Q8NGX8 325 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 IFI44Q8TCB0 444 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 TBC1D22AQ8WUA7 517 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 STYXQ8WUJ0 223 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ST8SIA4Q92187 359 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 GATA6Q92908 595 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 UBE2FQ969M7 185 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ATP6V1E2Q96A05 226 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 UBL7Q96S82 380 aaPredicted RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 CENPOQ9BU64 300 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PAIP1Q9H074 479 aaKnown RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PABPC3Q9H361 631 aaKnown RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 GHITMQ9H3K2 345 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 SMURF2Q9HAU4 748 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 NOD2Q9HC29 1040 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PCMTD2Q9NV79 361 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF212Q9UDV6 495 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 PCDHA6Q9UN73 950 aa4.89□□□□□ -1.63
AC055878.1-201ENST00000531858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A1W2PQ27 194 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A1W2PQ64 194 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A1W2PQC6 194 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A1W2PQD8 194 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 NT5C1B-RDH14C9J2C7 533 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 H7C0S8 307 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 P4HA2O15460 535 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 AHCYL1O43865 530 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 AKR1B10O60218 316 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 TSPAN3O60637 253 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MTA2O94776 668 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 NTRK1P04629 796 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 PRKCBP05771 671 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 LTA4HP09960 611 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ZSCAN22P10073 491 aaPredicted RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 TXNP10599 105 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 RAC2P15153 192 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 NPPBP16860 134 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms