RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PCDHGA2Q9Y5H1 932 aa9.14□□□□□ -0.95
CSDE1-213ENST00000530784 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
CSDE1-213ENST00000530784 SSH2Q76I76 1423 aa9.14□□□□□ -0.95
CSDE1-213ENST00000530784 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 AKAP8O43823 692 aaKnown RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 FAM20BO75063 409 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 IARSP41252 1262 aaKnown RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 MCAMP43121 646 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 EVA1CP58658 441 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 TUBA3CQ13748 450 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 CSRP2Q16527 193 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 METTL24Q5JXM2 366 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 MFSD14BQ5SR56 506 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 TUBA3EQ6PEY2 450 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 PDZD4Q76G19 769 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 GPRIN1Q7Z2K8 1008 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 PRPF38AQ8NAV1 312 aaKnown RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 ZBTB21Q9ULJ3 1066 aa9.13□□□□□ -0.95
CSDE1-213ENST00000530784 TNS1Q9HBL0 1735 aaKnown RBP9.13□□□□□ -0.95
CSDE1-213ENST00000530784 CPDO75976 1380 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 USP19O94966 1318 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 GRXCR1A8MXD5 290 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 NARSO43776 548 aaKnown RBP9.12□□□□□ -0.95
CSDE1-213ENST00000530784 GSPT1P15170 499 aaKnown RBP9.12□□□□□ -0.95
CSDE1-213ENST00000530784 AGXTP21549 392 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 ECHS1P30084 290 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 PTPN7P35236 360 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 ACVRL1P37023 503 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 NOMO1Q15155 1222 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 FNDC7Q5VTL7 733 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 PGM2L1Q6PCE3 622 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 FAM180AQ6UWF9 173 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 AMOTL1Q8IY63 956 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 TRMT2AQ8IZ69 625 aaKnown RBP9.12□□□□□ -0.95
CSDE1-213ENST00000530784 FBXO18Q8NFZ0 1043 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 OR7D4Q8NG98 312 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 ADI1Q9BV57 179 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 CCDC8Q9H0W5 538 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-213ENST00000530784 BCO1Q9HAY6 547 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 ZNF277Q9NRM2 450 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-213ENST00000530784 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
CSDE1-213ENST00000530784 LMO7Q8WWI1 1683 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 TRIM75PA6NK02 468 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 PRR5-ARHGAP8B1AHC4 643 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 WNT10BO00744 389 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 ZNF202O95125 648 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 GDF5P43026 501 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 MTMR1Q13613 665 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 CLUL1Q15846 466 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 EZH2Q15910 746 aaKnown RBP9.11□□□□□ -0.95
CSDE1-213ENST00000530784 HOXB13Q92826 284 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-213ENST00000530784 SPON1Q9HCB6 807 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 SLC2A4RGQ9NR83 387 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 TRHDEQ9UKU6 1024 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 SORCS3Q9UPU3 1222 aa9.11□□□□□ -0.95
CSDE1-213ENST00000530784 BRD4O60885 1362 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-213ENST00000530784 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 COL5A2P05997 1499 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-213ENST00000530784 KATNA1O75449 491 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 MT-CO1P00395 513 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 ITKQ08881 620 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 SYDE2Q5VT97 1194 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 TCP11L2Q8N4U5 519 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 C1orf162Q8NEQ5 155 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-213ENST00000530784 UHRF1Q96T88 793 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-213ENST00000530784 COL4A3BPQ9Y5P4 624 aa9.1□□□□□ -0.95
CSDE1-213ENST00000530784 USP6P35125 1406 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 TBKBP1A7MCY6 615 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 B5MCH6 92 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 GCP02774 474 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 SREBF1P36956 1147 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 SEPT2Q15019 361 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 USP51Q70EK9 711 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 ZFPM1Q8IX07 1006 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 PQLC1Q8N2U9 271 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 PPM1NQ8N819 430 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 SLC35B2Q8TB61 432 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 MTMR8Q96EF0 704 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 NDC1Q9BTX1 674 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 KCNH6Q9H252 994 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 PCDH12Q9NPG4 1184 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 MKS1Q9NXB0 559 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 DNM3Q9UQ16 869 aa9.09□□□□□ -0.95
CSDE1-213ENST00000530784 CRB1P82279 1406 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 FLT3LGP49771 235 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 PER3P56645 1201 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 BMT2Q1RMZ1 405 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 ABCB5Q2M3G0 1257 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 FAM47AQ5JRC9 791 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 GJC2Q5T442 439 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-213ENST00000530784 ZNF572Q7Z3I7 529 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-213ENST00000530784 CPT1CQ8TCG5 803 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 MMRN2Q9H8L6 949 aa9.08□□□□□ -0.96
CSDE1-213ENST00000530784 CLCA2Q9UQC9 943 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms