RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
NR1H3-230ENST00000527949 LAMP2P13473 410 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 GAP43P17677 238 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 LIG4P49917 911 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 MRPL58Q14197 206 aaKnown RBP12.12□□□□□ -0.47
NR1H3-230ENST00000527949 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 RRAGBQ5VZM2 374 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 C3orf58Q8NDZ4 430 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 HASPINQ8TF76 798 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 RABGGTAQ92696 567 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 OXCT2Q9BYC2 517 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-230ENST00000527949 OLFML3Q9NRN5 406 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 DLGAP2Q9P1A6 1054 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 FBXO4Q9UKT5 387 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
NR1H3-230ENST00000527949 DERAQ9Y315 318 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 DCHS1Q96JQ0 3298 aa12.12□□□□□ -0.47
NR1H3-230ENST00000527949 FRMD3A2A2Y4 597 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 ANHXE9PGG2 379 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 H7C4K7 107 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 PPP6R2O75170 966 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 RFPL2O75678 378 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 PPP1R37O75864 691 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 YEATS4O95619 227 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 RPL17P18621 184 aaKnown RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 STARD6P59095 220 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 OSTNP61366 133 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 ALCAMQ13740 583 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 RSPO2Q6UXX9 243 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 SV2BQ7L1I2 683 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 GPR152Q8TDT2 470 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 BICD1Q96G01 975 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 HAPLN2Q9GZV7 340 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 CUEDC2Q9H467 287 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 GOLGA2P5Q9HBQ8 144 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-230ENST00000527949 PCDHGA2Q9Y5H1 932 aa12.11□□□□□ -0.47
NR1H3-230ENST00000527949 DOCK6Q96HP0 2047 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ARHGEF37A1IGU5 675 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 M0QZQ0 153 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 N4BP1O75113 896 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 XYLBO75191 536 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ABLIM3O94929 683 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 CXCL8P10145 99 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 TKTP29401 623 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 OR1D2P34982 312 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 PFKPQ01813 784 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 LMNB2Q03252 620 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 PRKCQQ04759 706 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 PPP2R3AQ06190 1150 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 POSTNQ15063 836 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 TPGS2Q68CL5 300 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 CNNM4Q6P4Q7 775 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 MTSS1LQ765P7 747 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 APPL2Q8NEU8 664 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 RSAD2Q8WXG1 361 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 DDX12PQ92771 950 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ASB7Q9H672 318 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 RPF1Q9H9Y2 349 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 NCDNQ9UBB6 729 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
NR1H3-230ENST00000527949 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 ZNF292O60281 2723 aa12.1□□□□□ -0.47
NR1H3-230ENST00000527949 MYMKA6NI61 221 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 SPTLC2O15270 562 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 ADAM12O43184 909 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 LAMTOR5O43504 91 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 OAZ2O95190 189 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 C8AP07357 584 aa12.09□□□□□ -0.47
NR1H3-230ENST00000527949 HARSP12081 509 aaKnown RBP12.09□□□□□ -0.47
NR1H3-230ENST00000527949 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-230ENST00000527949 BRCC3P46736 316 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms