RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 C2CD2Q9Y426 696 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 A0A1B0GVL5 298 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 PVALEFA0A1B0GWK0 134 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 EIF3DO15371 548 aaKnown RBP eCLIP28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 RFPL2O75678 378 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 PFKFB1P16118 471 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 FAM26FQ5R3K3 315 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 APPL2Q8NEU8 664 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 FAM213AQ9BRX8 229 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 BLZF1Q9H2G9 400 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 MUTYHQ9UIF7 546 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 USTQ9Y2C2 406 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 CDY1Q9Y6F8 540 aa28.6■■■□□ 2.17
TSPAN4-217ENST00000527644 H7C4K7 107 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 ACTN4O43707 911 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 ZMYND10O75800 440 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 IL18RAPO95256 599 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 NFICP08651 508 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 SP100P23497 879 aaPredicted RBP28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 GUCY2FP51841 1108 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 NUCB2P80303 420 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 EHHADHQ08426 723 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 MRPL58Q14197 206 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 RSPO2Q6UXX9 243 aaPredicted RBP28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 TMEM130Q8N3G9 435 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 GLIS3Q8NEA6 775 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 PCDHB8Q9UN66 801 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 HPSEQ9Y251 543 aa28.59■■■□□ 2.17
TSPAN4-217ENST00000527644 M0QZQ0 153 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 KIAA0391O15091 583 aaKnown RBP28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 PAX3P23760 479 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 CASP1P29466 404 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 AARSP49588 968 aaKnown RBP eCLIP28.58■■■□□ 2.178e-6■■■■■ 52.4
TSPAN4-217ENST00000527644 CUL4BQ13620 913 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 LIN9Q5TKA1 542 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 SLC8B1Q6J4K2 584 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 CCDC149Q6ZUS6 474 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 EPM2AIP1Q7L775 607 aaPredicted RBP28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 ZNF507Q8TCN5 953 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 SMG7Q92540 1137 aaKnown RBP28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 ZNF707Q96C28 371 aaPredicted RBP28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 SAAL1Q96ER3 474 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 CBWD1Q9BRT8 395 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 PRKD2Q9BZL6 878 aa28.58■■■□□ 2.17
TSPAN4-217ENST00000527644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 FAM237AA0A1B0GTK4 181 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 C2CD4DB7Z1M9 353 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 TBC1D4O60343 1298 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 GPR37L1O60883 481 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 ARMCX5Q6P1M9 558 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 NT5DC4Q86YG4 428 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 PAGE5Q96GU1 130 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 TCHHQ07283 1943 aa28.57■■■□□ 2.16
TSPAN4-217ENST00000527644 A0A1W2PQ27 194 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 A0A1W2PQ64 194 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 A0A1W2PQD8 194 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 EXTL3O43909 919 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 HNRNPA1P09651 372 aaKnown RBP eCLIP28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 UVSSAQ2YD98 709 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 TMEM31Q5JXX7 168 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 C9orf57Q5W0N0 161 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 RTL10Q7L3V2 364 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 BRSK2Q8IWQ3 736 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 GRAMD1CQ8IYS0 662 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 PLCD3Q8N3E9 789 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 TDRD5Q8NAT2 981 aaKnown RBP28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 PCIF1Q9H4Z3 704 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 PIDD1Q9HB75 910 aa28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 WDR6Q9NNW5 1121 aaKnown RBP28.56■■■□□ 2.16
TSPAN4-217ENST00000527644 C2orf16Q68DN1 1984 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ANK1P16157 1881 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 UBE4BO95155 1302 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 PIRO00625 290 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 C8AP07357 584 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 HOXA9P31269 272 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 HOXD13P35453 343 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 SYKP43405 635 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 LILRA4P59901 499 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 PPM1LQ5SGD2 360 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ZNF280DQ6N043 979 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 DSTYKQ6XUX3 929 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 OTOP3Q7RTS5 596 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ZDHHC14Q8IZN3 488 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ZSWIM2Q8NEG5 633 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ZNF461Q8TAF7 563 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ACSF2Q96CM8 615 aaPredicted RBP28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 DPP3Q9NY33 737 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 RBAKQ9NYW8 714 aaPredicted RBP28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 FBXL5Q9UKA1 691 aa28.55■■■□□ 2.16
TSPAN4-217ENST00000527644 ANO9A1A5B4 782 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 PPEF2O14830 753 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 MYL1P05976 194 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 ROR1Q01973 937 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 CTXN3Q4LDR2 81 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 EFCAB13Q8IY85 973 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 GPD1LQ8N335 351 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 SCFD1Q8WVM8 642 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 C11orf16Q9NQ32 467 aa28.54■■■□□ 2.16
TSPAN4-217ENST00000527644 DENND4AQ7Z401 1863 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 GOLGA8IPA6NC78 632 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms